RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
TMCO1-209ENST00000628579 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
TMCO1-209ENST00000628579 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
TMCO1-209ENST00000628579 RMDN3Q96TC7 470 aa12.18□□□□□ -0.46
TMCO1-209ENST00000628579 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
TMCO1-209ENST00000628579 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
TMCO1-209ENST00000628579 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
TMCO1-209ENST00000628579 PNMA6FA0A0J9YX94 578 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 DDAH1O94760 285 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 TXNP10599 105 aaKnown RBP12.17□□□□□ -0.46
TMCO1-209ENST00000628579 EPHB4P54760 987 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 GHRHRQ02643 423 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 LRIT3Q3SXY7 679 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
TMCO1-209ENST00000628579 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
TMCO1-209ENST00000628579 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 TMEM87BQ96K49 555 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 MAF1Q9H063 256 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
TMCO1-209ENST00000628579 MROH7Q68CQ1 1323 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 B4DLN1 442 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 ZEB2O60315 1214 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 RAG1P15918 1043 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 LIFRP42702 1097 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 MRPL12P52815 198 aaKnown RBP12.16□□□□□ -0.46
TMCO1-209ENST00000628579 ITGA7Q13683 1181 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 SHHQ15465 462 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 SRBD1Q8N5C6 995 aaKnown RBP12.16□□□□□ -0.46
TMCO1-209ENST00000628579 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 MAP3K14Q99558 947 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
TMCO1-209ENST00000628579 CABYRO75952 493 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 CD4P01730 458 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 NEFLP07196 543 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 NR3C2P08235 984 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 MYL3P08590 195 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 KIF5BP33176 963 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 CPT1AP50416 773 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 PURAQ00577 322 aaKnown RBP12.15□□□□□ -0.46
TMCO1-209ENST00000628579 TTLL4Q14679 1199 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 STXBP2Q15833 593 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 TMTC2Q8N394 836 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
TMCO1-209ENST00000628579 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 TRPV6Q9H1D0 765 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
TMCO1-209ENST00000628579 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 A6NJR5 290 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
TMCO1-209ENST00000628579 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
TMCO1-209ENST00000628579 B4GALT4O60513 344 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 RGS20O76081 388 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 TIMP1P01033 207 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 MYCLP12524 364 aaPredicted RBP12.14□□□□□ -0.47
TMCO1-209ENST00000628579 CPA1P15085 419 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
TMCO1-209ENST00000628579 FPGSQ05932 587 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 PGM5Q15124 567 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 TSGA10IPQ3SY00 556 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 Q7L0L9 218 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 RRP36Q96EU6 259 aaKnown RBP12.14□□□□□ -0.47
TMCO1-209ENST00000628579 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 COL6A3P12111 3177 aa12.14□□□□□ -0.47
TMCO1-209ENST00000628579 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 SCN10AQ9Y5Y9 1956 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 CALM1P0DP23 149 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 CALM2P0DP24 149 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 CALM3P0DP25 149 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 CYP2C18P33260 490 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 TRAF1Q13077 416 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 APOA5Q6Q788 366 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms