RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 TSPY10P0CW01 314 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 HSPA1AP0DMV8 641 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 HSPA1BP0DMV9 641 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 MYBL1P10243 752 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PYGMP11217 842 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NQO1P15559 274 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 PTPN2P17706 415 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 GNAZP19086 355 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 KCNA3P22001 575 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 FECHP22830 423 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCNCP24863 283 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RXRBP28702 533 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CDC25CP30307 473 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 HOXD11P31277 338 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ATICP31939 592 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RFC5P40937 340 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SKIV2L2P42285 1042 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 HALP42357 657 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ACADSBP45954 432 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CDK7P50613 346 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ATP1A2P50993 1020 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PDE6CP51160 858 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ALDH5A1P51649 535 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 VAV2P52735 878 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 UBASH3AP57075 661 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NLRP12P59046 1061 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NCALDP61601 193 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ATP8B2P98198 1209 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CDK17Q00537 523 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 GUCY1A3Q02108 690 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 EXOSC9Q06265 439 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ST3GAL1Q11201 340 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RESTQ13127 1097 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 TBX2Q13207 712 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ITGB3BPQ13352 177 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 MSLNQ13421 630 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 LSAMPQ13449 338 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 BIRC3Q13489 604 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NCAPHQ15003 741 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 KARSQ15046 597 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ARHGEF6Q15052 776 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NONOQ15233 471 aaKnown RBP eCLIP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SEPT7Q16181 437 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 NDUFA5Q16718 116 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CNPY1Q3B7I2 92 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DPCR1Q3MIW9 517 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.1□□□□□ -2.07
TCF4-264ENST00000628391 COBLL1Q53SF7 1204 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ZNF569Q5MCW4 686 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC122Q5T0U0 273 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 FKBP15Q5T1M5 1219 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SYDE2Q5VT97 1194 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RNF220Q5VTB9 566 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 FOXB2Q5VYV0 432 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 KAZNQ674X7 775 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SPECC1LQ69YQ0 1117 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 TRIM68Q6AZZ1 485 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NCAPH2Q6IBW4 605 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 OR52E8Q6IFG1 317 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 KANK3Q6NY19 840 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC174Q6PII3 467 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLC2A7Q6PXP3 512 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 LRIG3Q6UXM1 1119 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CYP26C1Q6V0L0 522 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCNI2Q6ZMN8 369 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC129Q6ZRS4 1044 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 C3orf67Q6ZVT6 689 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NEK10Q6ZWH5 1172 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SND1Q7KZF4 910 aaKnown RBP eCLIP2.1□□□□□ -2.07
TCF4-264ENST00000628391 RUFY3Q7L099 469 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 TRAPPC11Q7Z392 1133 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ZNF572Q7Z3I7 529 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 CABP7Q86V35 215 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PNMA8AQ86V59 439 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 PPFIBP1Q86W92 1011 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RAB11FIP4Q86YS3 637 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PASD1Q8IV76 773 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 MAP7D3Q8IWC1 876 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SIRT2Q8IXJ6 389 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 GSPT2Q8IYD1 628 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ALDH16A1Q8IZ83 802 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 LSMEM2Q8N112 164 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CLASRPQ8N2M8 674 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLC35F6Q8N357 371 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 MMGT1Q8N4V1 131 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ESX1Q8N693 406 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ENDOVQ8N8Q3 282 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 TC2NQ8N9U0 490 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLC43A3Q8NBI5 491 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC197Q8NCU1 140 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ENGASEQ8NFI3 743 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 LINS1Q8NG48 757 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.1□□□□□ -2.07
TCF4-264ENST00000628391 RBM46Q8TBY0 533 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 ASAP3Q8TDY4 903 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 MORC4Q8TE76 937 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ATP8B4Q8TF62 1192 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NOC3LQ8WTT2 800 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 DNAJC9Q8WXX5 260 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms