RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 TESPA1A2RU30 521 aaPredicted RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 TOP1P11387 765 aaKnown RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 OSBPP22059 807 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 KCNJ6P48051 423 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 TMCO3Q6UWJ1 677 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 FASTKD5Q7L8L6 764 aaKnown RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 LRRN4CLQ8ND94 238 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 STAG1Q8WVM7 1258 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 PPP1R16BQ96T49 567 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 SH2B1Q9NRF2 756 aaPredicted RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 ARGLU1Q9NWB6 273 aaPredicted RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 CWC15Q9P013 229 aaKnown RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 ORC3Q9UBD5 711 aaPredicted RBP7.03□□□□□ -1.28
CHD2-215ENST00000628375 SWAP70Q9UH65 585 aa7.03□□□□□ -1.28
CHD2-215ENST00000628375 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.03□□□□□ -1.281e-8■■■■□ 19.7
CHD2-215ENST00000628375 RFX7Q2KHR2 1363 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 PITPNM2Q9BZ72 1349 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SMCHD1A6NHR9 2005 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 TRIM66O15016 1216 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 CYTH3O43739 400 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 PSMA5P28066 241 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 ST3GAL1Q11201 340 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SREBF2Q12772 1141 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 GPS2Q13227 327 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 KIF22Q14807 665 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 ARHGAP29Q52LW3 1261 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 FKBP1CQ5VVH2 108 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 APOA5Q6Q788 366 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 POTEEQ6S8J3 1075 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 FBXO18Q8NFZ0 1043 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 TRIM47Q96LD4 638 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 ZSCAN31Q96LW9 406 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 MOV10L1Q9BXT6 1211 aaKnown RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 DNAJC25Q9H1X3 360 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 LY9Q9HBG7 655 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 TMX2Q9Y320 296 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SSC5DA1L4H1 1573 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 MANSC4A6NHS7 340 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 ZBED4O75132 1171 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 PGK1P00558 417 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 RPS6KB1P23443 525 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 NAPAP54920 295 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 PPIL2Q13356 520 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 CDC37Q16543 378 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 QRICH1Q2TAL8 776 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 PRPF38AQ8NAV1 312 aaKnown RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 GPRC5AQ8NFJ5 357 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 ZBTB9Q96C00 473 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 PLIN2Q99541 437 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SLF1Q9BQI6 1058 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 SEC63Q9UGP8 760 aaKnown RBP7.02□□□□□ -1.29
CHD2-215ENST00000628375 PTCH2Q9Y6C5 1203 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 CHD7Q9P2D1 2997 aa7.02□□□□□ -1.29
CHD2-215ENST00000628375 CHMP2AO43633 222 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 TLR2O60603 784 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 GSDMDP57764 484 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 NLRP5P59047 1200 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 DHX8Q14562 1220 aaKnown RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 SLC9C1Q4G0N8 1177 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 E4F1Q66K89 784 aaPredicted RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 GPAT2Q6NUI2 795 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 REXO1L1PQ8IX06 675 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 MB21D2Q8IYB1 491 aaPredicted RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 C10orf67Q8IYJ2 551 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 CYP2W1Q8TAV3 490 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 PPP1R13BQ96KQ4 1090 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 RNF146Q9NTX7 359 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 WBP1LQ9NX94 342 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 TRMT1Q9NXH9 659 aaKnown RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 HOXC10Q9NYD6 342 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 TFIP11Q9UBB9 837 aaKnown RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 VWA5AO00534 786 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 POLR3GO15318 223 aaPredicted RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 TPM1P09493 284 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 GUCY2CP25092 1073 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 PDIA3P30101 505 aaKnown RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 CDC25AP30304 524 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 ZNF76P36508 570 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 ERVK-9P63128 1117 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 ERVK-24P63145 666 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 SCRN1Q12765 414 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 TOB2Q14106 344 aaPredicted RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 KCTD2Q14681 263 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 EXOC4Q96A65 974 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 PDGFCQ9NRA1 345 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 AGTPBP1Q9UPW5 1226 aa7.01□□□□□ -1.29
CHD2-215ENST00000628375 BRCA1P38398 1863 aaKnown RBP7.01□□□□□ -1.29
CHD2-215ENST00000628375 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms