RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ZNF536O15090 1300 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CYP3A7-CYP3A51PA0A087WV96 503 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 POTEFA5A3E0 1075 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 TTLL13PA6NNM8 815 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 ATP2A1O14983 1001 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CFBP00751 764 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CCDC192P0DO97 292 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 PYGBP11216 843 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CYP3A7P24462 503 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 HOXA7P31268 230 aaPredicted RBP8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 HSD17B4P51659 736 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 GHRHRQ02643 423 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 GRIN1Q05586 938 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 PABPC4Q13310 644 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CAMK4Q16566 473 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 TMEM266Q2M3C6 531 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 TKFCQ3LXA3 575 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 SASS6Q6UVJ0 657 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 GADL1Q6ZQY3 521 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 FASTKD5Q7L8L6 764 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CPXCR1Q8N123 301 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 MB21D1Q8N884 522 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 C2orf69Q8N8R5 385 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 AGBL1Q96MI9 1066 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 RAB34Q9BZG1 259 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 TMEM60Q9H2L4 133 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 RAVER2Q9HCJ3 691 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 DDX25Q9UHL0 483 aaKnown RBP8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
PTP4A1-206ENST00000627002 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TRAF5O00463 557 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 IRF6O14896 467 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TBX3O15119 743 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TDP2O95551 362 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 CYP3A4P08684 503 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 ALAS1P13196 640 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 HOXA13P31271 388 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 CIITAP33076 1130 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TIE1P35590 1138 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 MRE11P49959 708 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 SNAPC2Q13487 334 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 ZRSR1Q15695 479 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 IL17AQ16552 155 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 Q4G0T1 1027 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 SPECC1Q5M775 1068 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 LBX2Q6XYB7 198 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 MOB2Q70IA6 237 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 CNNM3Q8NE01 707 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 REPS2Q8NFH8 660 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 CRYGNQ8WXF5 182 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 CLEC4DQ8WXI8 215 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 MBOAT7Q96N66 472 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TRERF1Q96PN7 1200 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 MTMR9Q96QG7 549 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 TEX13BQ9BXU2 312 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 GBA2Q9HCG7 927 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 AGTPBP1Q9UPW5 1226 aa8.53□□□□□ -1.04
PTP4A1-206ENST00000627002 POLR2DO15514 142 aaKnown RBP8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 SLC26A4O43511 780 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 SLC37A4O43826 429 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 EDIL3O43854 480 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 MARCH6O60337 910 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 CAVIN2O95810 425 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 TAL1P17542 331 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 OSBPP22059 807 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 COPB2P35606 906 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 ZNF76P36508 570 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 UBA7P41226 1012 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 IRX3P78415 501 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 TYRO3Q06418 890 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 PDIA5Q14554 519 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 TREML2Q5T2D2 321 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 SNRNP48Q6IEG0 339 aaKnown RBP8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 FCHSD1Q86WN1 690 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 GAS2L3Q86XJ1 694 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 CKAP2LQ8IYA6 745 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 SLFN12Q8IYM2 578 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 CEP57L1Q8IYX8 460 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 IGSF22Q8N9C0 903 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 IQUBQ8NA54 791 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 EPSTI1Q96J88 318 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 FUCA2Q9BTY2 467 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 CCSER1Q9C0I3 900 aa8.52□□□□□ -1.05
PTP4A1-206ENST00000627002 RNF146Q9NTX7 359 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms