RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 RASA3Q14644 834 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 TNIP1Q15025 636 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 ECM1Q16610 540 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 KCNK18Q7Z418 384 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 CCDC125Q86Z20 511 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 GIMAP8Q8ND71 665 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 CRYGNQ8WXF5 182 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 CDK5RAP3Q96JB5 506 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 ADD3Q9UEY8 706 aaKnown RBP22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 HOXA13P31271 388 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 MMP14P50281 582 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 USP11P51784 963 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 PRELPP51888 382 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 TERF1P54274 439 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 ARHGAP4P98171 946 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 KRT79Q5XKE5 535 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 SPECC1LQ69YQ0 1117 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 PCDHA12Q9UN75 941 aa22.05■■□□□ 1.12
CHRNA4-209ENST00000627000 ASTN2O75129 1339 aaPredicted RBP22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 PDE4DQ08499 809 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 VCPKMTQ9H867 229 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 SAMD1Q6SPF0 538 aaPredicted RBP22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 SV2BQ7L1I2 683 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 CCAR2Q8N163 923 aaKnown RBP22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 HPS3Q969F9 1004 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 KIFC2Q96AC6 838 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 MBOAT7Q96N66 472 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 KCNMB3Q9NPA1 279 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 STK17AQ9UEE5 414 aa22.04■■□□□ 1.12
CHRNA4-209ENST00000627000 CYP3A7-CYP3A51PA0A087WV96 503 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 MYMKA6NI61 221 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 FCER1AP12319 257 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 CYP3A7P24462 503 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 ZNF280AP59817 542 aaPredicted RBP22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 MAP3K10Q02779 954 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 STK4Q13043 487 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 TMEM119Q4V9L6 283 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 E4F1Q66K89 784 aaPredicted RBP22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 CCDC174Q6PII3 467 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 SAMD7Q7Z3H4 446 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 NAP1L4Q99733 375 aaKnown RBP22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 SGIP1Q9BQI5 828 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 EXOC1Q9NV70 894 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 ATAD5Q96QE3 1844 aa22.03■■□□□ 1.12
CHRNA4-209ENST00000627000 UQCRHLA0A096LP55 91 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 UQCRHP07919 91 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 CCT6AP40227 531 aaKnown RBP22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 AMPD3Q01432 767 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 KRT31Q15323 416 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 RAD54LQ92698 747 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 TMX1Q9H3N1 280 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 SPDYE3A6NKU9 549 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 TNNT1P13805 278 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 ADKP55263 362 aaKnown RBP22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 TBC1D5Q92609 795 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 TEPSINQ96N21 525 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 FBXO28Q9NVF7 368 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 LIMA1Q9UHB6 759 aaKnown RBP22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 UTRNP46939 3433 aa22.02■■□□□ 1.12
CHRNA4-209ENST00000627000 PHF20L1A8MW92 1017 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 GMPSP49915 693 aaPredicted RBP22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 PRR16Q569H4 304 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 DYMQ7RTS9 669 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 CREBRFQ8IUR6 639 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 MICALL2Q8IY33 904 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 GJA3Q9Y6H8 435 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 SREBF1P36956 1147 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 PBX1P40424 430 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 STAT3P40763 770 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 IRF2BP1Q8IU81 584 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 TC2NQ8N9U0 490 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 CTAGE1Q96RT6 745 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 VPS16Q9H269 839 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 TAB2Q9NYJ8 693 aa22.01■■□□□ 1.11
CHRNA4-209ENST00000627000 KCNJ18B7U540 433 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 FAM86B1E9PN63 330 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 ASNSP08243 561 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 FAM86B2P0C5J1 330 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 KCNJ12Q14500 433 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 TBC1D10BQ4KMP7 808 aaPredicted RBP22■■□□□ 1.11
CHRNA4-209ENST00000627000 TCP11X2Q5H9J9 407 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 TMEM139Q8IV31 216 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 CCDC47Q96A33 483 aaKnown RBP22■■□□□ 1.11
CHRNA4-209ENST00000627000 LENG9Q96B70 501 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 RANBP17Q9H2T7 1088 aaKnown RBP22■■□□□ 1.11
CHRNA4-209ENST00000627000 KCND1Q9NSA2 647 aa22■■□□□ 1.11
CHRNA4-209ENST00000627000 H7C1D1 291 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 PSMA7O14818 248 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 SEMA3FQ13275 785 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 STIM1Q13586 685 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 MOXD1Q6UVY6 613 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 FCHSD1Q86WN1 690 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 KIAA0895Q8NCT3 520 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 ETNPPLQ8TBG4 499 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 CHURC1Q8WUH1 139 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 PRIMPOLQ96LW4 560 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 CD2APQ9Y5K6 639 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 NRDCO43847 1150 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 FOSP01100 380 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms