RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 PIK3C2BO00750 1634 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 FTCDO95954 541 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 CDC25AP30304 524 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 LRRC63Q05C16 580 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.96□□□□□ -0.33
ATRX-214ENST00000624166 GRID2IPA4D2P6 1211 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 DESP17661 470 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 HIBADHP31937 336 aaKnown RBP12.96□□□□□ -0.33
ATRX-214ENST00000624166 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
ATRX-214ENST00000624166 ZKSCAN8Q15776 578 aaPredicted RBP12.96□□□□□ -0.33
ATRX-214ENST00000624166 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 EPN3Q9H201 632 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 METTL14Q9HCE5 456 aaKnown RBP12.96□□□□□ -0.33
ATRX-214ENST00000624166 ASIC3Q9UHC3 531 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 DPYDQ12882 1025 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 FBXL16Q8N461 479 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
ATRX-214ENST00000624166 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
ATRX-214ENST00000624166 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 SPDYE3A6NKU9 549 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 TRIM37O94972 964 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 ANTXR2P58335 489 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 MAIP1Q8WWC4 291 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.34
ATRX-214ENST00000624166 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.34
ATRX-214ENST00000624166 DAAM1Q9Y4D1 1078 aa12.96□□□□□ -0.34
ATRX-214ENST00000624166 ERBB3P21860 1342 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 TULP2O00295 520 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 PRKAB2O43741 272 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 CHGBP05060 677 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 ZNF365Q70YC5 407 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 SOS2Q07890 1332 aaPredicted RBP12.95□□□□□ -0.34
ATRX-214ENST00000624166 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
ATRX-214ENST00000624166 BCAMP50895 628 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 ATP2C1P98194 919 aaPredicted RBP12.95□□□□□ -0.34
ATRX-214ENST00000624166 PSMD2Q13200 908 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
ATRX-214ENST00000624166 KCNB1Q14721 858 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 COL4A3BPQ9Y5P4 624 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 MROH1Q8NDA8 1641 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATRX-214ENST00000624166 FOXO4P98177 505 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 SF3A3Q12874 501 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATRX-214ENST00000624166 RBBP5Q15291 538 aaKnown RBP12.95□□□□□ -0.34
ATRX-214ENST00000624166 ARHGAP24Q8N264 748 aa12.95□□□□□ -0.34
ATRX-214ENST00000624166 HNRNPH1P31943 449 aaKnown RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 NT5C2P49902 561 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 MXRA7P84157 204 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 ADAM9Q13443 819 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 GBP7Q8N8V2 638 aaPredicted RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 KLHL29Q96CT2 875 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 EDEM3Q9BZQ6 932 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 TRIM6Q9C030 488 aaPredicted RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 HOMER2Q9NSB8 354 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 ATP8A2Q9NTI2 1148 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 PANK4Q9NVE7 773 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 LRRIQ3A6PVS8 624 aaPredicted RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 GAS8O95995 478 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 ZNF18P17022 549 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 ATP8A1Q9Y2Q0 1164 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 BCRP11274 1271 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 PLCG1P19174 1290 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 PARP9Q8IXQ6 854 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 IGDCC4Q8TDY8 1250 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
ATRX-214ENST00000624166 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
ATRX-214ENST00000624166 HSPA6P17066 643 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 MDH1P40925 334 aaKnown RBP12.93□□□□□ -0.34
ATRX-214ENST00000624166 EXOC3L4Q17RC7 722 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 ANKRD42Q8N9B4 389 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 MGARPQ8TDB4 240 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 FMO2Q99518 471 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 PPP1R12CQ9BZL4 782 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 TAF1DQ9H5J8 278 aaPredicted RBP12.93□□□□□ -0.34
ATRX-214ENST00000624166 FRMD3A2A2Y4 597 aa12.93□□□□□ -0.34
ATRX-214ENST00000624166 LRRD1A4D1F6 860 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms