RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 KDM5AP29375 1690 aaKnown RBP6.95□□□□□ -1.3
ERCC6-209ENST00000623073 MAP3K15Q6ZN16 1313 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 NCOA3Q9Y6Q9 1424 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 CHRNA3P32297 505 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 PAPOLAP51003 745 aaKnown RBP6.95□□□□□ -1.3
ERCC6-209ENST00000623073 COPB1P53618 953 aaKnown RBP6.95□□□□□ -1.3
ERCC6-209ENST00000623073 GRIN1Q05586 938 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 TRMT10CQ7L0Y3 403 aaKnown RBP6.95□□□□□ -1.3
ERCC6-209ENST00000623073 ABTB2Q8N961 1025 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 SYCP2Q9BX26 1530 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 ITIH6Q6UXX5 1313 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 SPAG6O75602 509 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 SERPINB3P29508 390 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 PDE4DQ08499 809 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 LRMPQ12912 555 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 E2F5Q15329 346 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 CEP55Q53EZ4 464 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 UBE3BQ7Z3V4 1068 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 SIKE1Q9BRV8 207 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 PITPNM3Q9BZ71 974 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 EPC1Q9H2F5 836 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 KDM4CQ9H3R0 1056 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 GPR108Q9NPR9 543 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 CLASP2O75122 1294 aaKnown RBP6.95□□□□□ -1.3
ERCC6-209ENST00000623073 ATP5JP18859 108 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 PCGF5Q86SE9 256 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 NECTIN2Q92692 538 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 KCNK16Q96T55 309 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 WWP1Q9H0M0 922 aa6.95□□□□□ -1.3
ERCC6-209ENST00000623073 FSBPO95073 299 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SEC24BO95487 1268 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 VHLP40337 213 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SLC12A2P55011 1212 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 NONOQ15233 471 aaKnown RBP eCLIP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 FAM133BQ5BKY9 247 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KRT40Q6A162 431 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CNBD1Q8NA66 436 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SSH3Q8TE77 659 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 MEIS3Q99687 375 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 GIMAP4Q9NUV9 329 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SNRPA1P09661 255 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 FKBP3Q00688 224 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PPP2R5CQ13362 524 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 ATAD3BQ5T9A4 648 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 BZW1Q7L1Q6 419 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TSPYL6Q8N831 410 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SPC25Q9HBM1 224 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 POLR2DO15514 142 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CDH2P19022 906 aaPredicted RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 MCM10Q7L590 875 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TTC1Q99614 292 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TRAIPQ9BWF2 469 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TSC22D4Q9Y3Q8 395 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SMIM31A0A1B0GVY4 71 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 BTNL9Q6UXG8 535 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SLC35F6Q8N357 371 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 HPS3Q969F9 1004 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CCDC127Q96BQ5 260 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 RBM42Q9BTD8 480 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 DCLRE1BQ9H816 532 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 UBN1Q9NPG3 1134 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 RIMS2Q9UQ26 1411 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 GOLGA8IPA6NC78 632 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KCNK3O14649 394 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KDM1AO60341 852 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 RSPH3Q86UC2 560 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 MTBPQ96DY7 904 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CNBD2Q96M20 576 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 MAD1L1Q9Y6D9 718 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CDH16O75309 829 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CRCPO75575 148 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PRLRP16471 622 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CC2D2BQ6DHV5 1058 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 ARHGAP22Q7Z5H3 698 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PDIK1LQ8N165 341 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 USP33Q8TEY7 942 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SNX5Q9Y5X3 404 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SERPINB1P30740 379 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 MDH1P40925 334 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 NAPAP54920 295 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 EVA1CP58658 441 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 GUCY1B3Q02153 619 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KDM7AQ6ZMT4 941 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 KRT27Q7Z3Y8 459 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 CCDC125Q86Z20 511 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 TRPC4APQ8TEL6 797 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 PRPF31Q8WWY3 499 aaKnown RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 YIPF3Q9GZM5 350 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 VPS37BQ9H9H4 285 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 ZNF277Q9NRM2 450 aaPredicted RBP6.94□□□□□ -1.3
ERCC6-209ENST00000623073 POGZQ7Z3K3 1410 aa6.94□□□□□ -1.3
ERCC6-209ENST00000623073 SYCE1LA8MT33 242 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms