RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 RAD54LQ92698 747 aa25.54■■□□□ 1.68
NKX2-3-202ENST00000622383 PPP1R2P41236 205 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 ERCC6LQ2NKX8 1250 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 KRT79Q5XKE5 535 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 KCNK18Q7Z418 384 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 CDK5RAP3Q96JB5 506 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 TDRD3Q9H7E2 651 aaKnown RBP25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 MAGEC2Q9UBF1 373 aaPredicted RBP25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 PCDHA1Q9Y5I3 950 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 PVALEFA0A1B0GWK0 134 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L15C9J2P7 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L13C9JLJ4 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L11C9JVI0 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L18D6R9N7 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L22D6RA61 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L17D6RBQ6 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L19D6RCP7 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L20D6RJB6 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 KRT9P35527 623 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 ICA1Q05084 483 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L24Q0WX57 530 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 CDC37Q16543 378 aaPredicted RBP25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 USP17L6PQ6QN14 398 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 TMEM179Q6ZVK1 233 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 UNC13DQ70J99 1090 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 GJA10Q969M2 543 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 EEF2KMTQ96G04 330 aa25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 IRX2Q9BZI1 471 aaPredicted RBP25.53■■□□□ 1.68
NKX2-3-202ENST00000622383 GDF11O95390 407 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 GCFC2P16383 781 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 ECM1Q16610 540 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 ZNF397Q8NF99 534 aaPredicted RBP25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 TUBGCP2Q9BSJ2 902 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 TRIM34Q9BYJ4 488 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 SEMA6BQ9H3T3 888 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 SLC39A2Q9NP94 309 aa25.52■■□□□ 1.68
NKX2-3-202ENST00000622383 ATRNL1Q5VV63 1379 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 TTC26A0AVF1 554 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 JAG1P78504 1218 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 MAP3K9P80192 1104 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 CYP26C1Q6V0L0 522 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 GLT8D2Q9H1C3 349 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 LZTFL1Q9NQ48 299 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 YDJCA8MPS7 323 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 B4DLN1 442 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 ABCB5Q2M3G0 1257 aa25.51■■□□□ 1.67
NKX2-3-202ENST00000622383 F5H6K3 240 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 DNM2P50570 870 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 KLRC3Q07444 240 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 CENPPQ6IPU0 288 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 FBXO38Q6PIJ6 1188 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 DYMQ7RTS9 669 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 GMCL1P1Q8NEA9 526 aa25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 PRMT6Q96LA8 375 aaPredicted RBP25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 CNOT6LQ96LI5 555 aaKnown RBP25.5■■□□□ 1.67
NKX2-3-202ENST00000622383 ENTPD3O75355 529 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 PRKCSHP14314 528 aaPredicted RBP25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 ACRBPQ8NEB7 543 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 GMCL1Q96IK5 515 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 DNAJC7Q99615 494 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 NAP1L4Q99733 375 aaKnown RBP25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 CARD6Q9BX69 1037 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 PCDHA12Q9UN75 941 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 MRFAP1Q9Y605 127 aa25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 TNS1Q9HBL0 1735 aaKnown RBP25.49■■□□□ 1.67
NKX2-3-202ENST00000622383 PES1O00541 588 aaKnown RBP25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 MEIS2O14770 477 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 NDUFB10O96000 172 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 EHHADHQ08426 723 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 RRP1BQ14684 758 aaKnown RBP25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 SLC15A2Q16348 729 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 FAM114A1Q8IWE2 563 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 DDX12PQ92771 950 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 ANO3Q9BYT9 981 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 CAPN11Q9UMQ6 739 aa25.48■■□□□ 1.67
NKX2-3-202ENST00000622383 NKRFO15226 690 aaKnown RBP eCLIP25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 TADA3O75528 432 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 USP11P51784 963 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 MIIPQ5JXC2 388 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 OR8K1Q8NGG5 319 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 P2RX7Q99572 595 aaKnown RBP25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 CHP1Q99653 195 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 CYP3A7-CYP3A51PA0A087WV96 503 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 RASSF10A6NK89 507 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 CYP3A7P24462 503 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 SNAP25P60880 206 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 HYIQ5T013 277 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 MNS1Q8NEH6 495 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 MBOAT7Q96N66 472 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 FEZ1Q99689 392 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 TTYH3Q9C0H2 523 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 KCNMB3Q9NPA1 279 aa25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 LUC7L2Q9Y383 392 aaKnown RBP25.47■■□□□ 1.67
NKX2-3-202ENST00000622383 GOLGB1Q14789 3259 aaKnown RBP25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 GH2P01242 217 aa25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 CC2D2BQ6DHV5 1058 aa25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 GUF1Q8N442 669 aaKnown RBP25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 CRYGNQ8WXF5 182 aa25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 MYH7BA7E2Y1 1941 aa25.46■■□□□ 1.67
NKX2-3-202ENST00000622383 PPIP5K2O43314 1243 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms