RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 FMR1Q06787 632 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF268Q14587 947 aaPredicted RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PPP1R7Q15435 360 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF827Q17R98 1081 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 APBB1IPQ7Z5R6 666 aaPredicted RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SESTD1Q86VW0 696 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 KIAA0825Q8IV33 1275 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 LMNTD2Q8IXW0 634 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 GRAMD1CQ8IYS0 662 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 MREGQ8N565 214 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 AGAP11Q8TF27 550 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ARAP2Q8WZ64 1704 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PIGBQ92521 554 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ATP6V1G3Q96LB4 118 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC4A9Q96Q91 983 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 STRBPQ96SI9 672 aaKnown RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC26A6Q9BXS9 759 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 CNNM1Q9NRU3 951 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 TMCO1Q9UM00 188 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PRKAB2O43741 272 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PDE6BP35913 854 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SEC24CP53992 1094 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 MDM2Q00987 491 aaPredicted RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 NR1I3Q14994 352 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 UBE3CQ15386 1083 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 TMEM67Q5HYA8 995 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 GIGYF2Q6Y7W6 1299 aaKnown RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ELOA2Q8IYF1 753 aaPredicted RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SH2D3CQ8N5H7 860 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 MAIP1Q8WWC4 291 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 RRP36Q96EU6 259 aaKnown RBP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 HAUS4Q9H6D7 363 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 TMOD3Q9NYL9 352 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ATXN10Q9UBB4 475 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 CTNNAL1Q9UBT7 734 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 KCNH3Q9ULD8 1083 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 KCNJ14Q9UNX9 436 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC12A4Q9UP95 1085 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF510Q9Y2H8 683 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 C2CD2Q9Y426 696 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 CASZ1Q86V15 1759 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 DOCK2Q92608 1830 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 A0A0U1RQJ8 604 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 BTBD18B2RXH4 712 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 IRS4O14654 1257 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 IFIT3O14879 490 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 TRAPPC3O43617 180 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 MBD4O95243 580 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 IARSP41252 1262 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 ITGB3BPQ13352 177 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 BYSLQ13895 437 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 CFAP58Q5T655 872 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 GKAP1Q5VSY0 366 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 MAATS1Q7Z4T9 603 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 SGMS1Q86VZ5 419 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 TRMT44Q8IYL2 757 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 RNF168Q8IYW5 571 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 TSEN2Q8NCE0 465 aaKnown RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 CAGE1Q8TC20 777 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF512BQ96KM6 892 aaPredicted RBP8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 AGAP3Q96P47 875 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 MED15Q96RN5 788 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 YIPF2Q9BWQ6 316 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 ZSWIM5Q9P217 1185 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 MAN1B1Q9UKM7 699 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 LEMD3Q9Y2U8 911 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 NUB1Q9Y5A7 615 aa8.26□□□□□ -1.09
TRIM49B-202ENST00000622138 DPPA5A6NC42 116 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 SMIM22K7EJ46 135 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 WFS1O76024 890 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 PDE8BO95263 885 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 YY1P25490 414 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 RPL13P26373 211 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 PBX1P40424 430 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 SH3BGRP55822 239 aaPredicted RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 PAK2Q13177 524 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 RASGRF1Q13972 1273 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TRIM14Q14142 442 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 PABPC1LQ4VXU2 614 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ANKRD20A2Q5SQ80 823 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ANKRD20A1Q5TYW2 823 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms