RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 RAG1P15918 1043 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 ITGB8P26012 769 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 HSD17B4P51659 736 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 ZNF654Q8IZM8 581 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 PIGSQ96S52 555 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 IWS1Q96ST2 819 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 MAP3K20Q9NYL2 800 aaKnown RBP22.85■■□□□ 1.25
PTBP1-219ENST00000621737 TBX21Q9UL17 535 aa22.85■■□□□ 1.25
PTBP1-219ENST00000621737 CFBP00751 764 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 CPT1AP50416 773 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 RNF20Q5VTR2 975 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 GPR153Q6NV75 609 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 FAM126BQ8IXS8 530 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 TMTC2Q8N394 836 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 SLC43A3Q8NBI5 491 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 OR6J1Q8NGC5 347 aa22.84■■□□□ 1.25
PTBP1-219ENST00000621737 CTCFLQ8NI51 663 aaPredicted RBP22.84■■□□□ 1.25
PTBP1-219ENST00000621737 GPHNQ9NQX3 736 aaPredicted RBP22.84■■□□□ 1.25
PTBP1-219ENST00000621737 PNMA6FA0A0J9YX94 578 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 TLR3O15455 904 aaKnown RBP22.83■■□□□ 1.25
PTBP1-219ENST00000621737 KIF5BP33176 963 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 TTLL4Q14679 1199 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 ARHGEF16Q5VV41 709 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 SAMD3Q8N6K7 520 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 SEZ6LQ9BYH1 1024 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 POLR3EQ9NVU0 708 aa22.83■■□□□ 1.25
PTBP1-219ENST00000621737 KIAA1217Q5T5P2 1943 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 BAZ2BQ9UIF8 2168 aaKnown RBP22.82■■□□□ 1.24
PTBP1-219ENST00000621737 CCDC69A6NI79 296 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 TXNP10599 105 aaKnown RBP22.82■■□□□ 1.24
PTBP1-219ENST00000621737 LIFRP42702 1097 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 ITGA7Q13683 1181 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 COL9A3Q14050 684 aaPredicted RBP22.82■■□□□ 1.24
PTBP1-219ENST00000621737 STXBP2Q15833 593 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 NFXL1Q6ZNB6 911 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 MYL10Q9BUA6 226 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 SPZ1Q9BXG8 430 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 PXMP2Q9NR77 195 aa22.82■■□□□ 1.24
PTBP1-219ENST00000621737 EIF2AK2P19525 551 aaKnown RBP22.81■■□□□ 1.24
PTBP1-219ENST00000621737 FPGSQ05932 587 aa22.81■■□□□ 1.24
PTBP1-219ENST00000621737 BRDTQ58F21 947 aaPredicted RBP22.81■■□□□ 1.24
PTBP1-219ENST00000621737 LZTS2Q9BRK4 669 aa22.81■■□□□ 1.24
PTBP1-219ENST00000621737 GRIN2DO15399 1336 aa22.81■■□□□ 1.24
PTBP1-219ENST00000621737 LAMA2P24043 3122 aaKnown RBP22.8■■□□□ 1.24
PTBP1-219ENST00000621737 ARIH2O95376 493 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 TIMP1P01033 207 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 CD4P01730 458 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 SMARCA1P28370 1054 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 PURAQ00577 322 aaKnown RBP22.8■■□□□ 1.24
PTBP1-219ENST00000621737 SHHQ15465 462 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 C9orf50Q5SZB4 431 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 CCDC62Q6P9F0 684 aa22.8■■□□□ 1.24
PTBP1-219ENST00000621737 A6NJR5 290 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 GCOM1H8Y6P7 765 aaPredicted RBP22.79■■□□□ 1.24
PTBP1-219ENST00000621737 EIF3JO75822 258 aaKnown RBP22.79■■□□□ 1.24
PTBP1-219ENST00000621737 NEFLP07196 543 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 NR3C2P08235 984 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 POLR2MP0CAP2 368 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 CALM1P0DP23 149 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 CALM2P0DP24 149 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 CALM3P0DP25 149 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
PTBP1-219ENST00000621737 GNAQP50148 359 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 PSMC6P62333 389 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 SEPT14Q6ZU15 432 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 COPS5Q92905 334 aa22.79■■□□□ 1.24
PTBP1-219ENST00000621737 MYL3P08590 195 aa22.78■■□□□ 1.24
PTBP1-219ENST00000621737 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
PTBP1-219ENST00000621737 SGMS1Q86VZ5 419 aa22.78■■□□□ 1.24
PTBP1-219ENST00000621737 RRP36Q96EU6 259 aaKnown RBP22.78■■□□□ 1.24
PTBP1-219ENST00000621737 PDCD2LQ9BRP1 358 aa22.78■■□□□ 1.24
PTBP1-219ENST00000621737 MTG1Q9BT17 334 aaPredicted RBP22.78■■□□□ 1.24
PTBP1-219ENST00000621737 SLC12A7Q9Y666 1083 aa22.78■■□□□ 1.24
PTBP1-219ENST00000621737 KPNA6O60684 536 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 PLEKHA8P1O95397 391 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 EPHB4P54760 987 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 TSGA10IPQ3SY00 556 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 PIBF1Q8WXW3 757 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 NEK1Q96PY6 1258 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 LRRC2Q9BYS8 371 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 SEC63Q9UGP8 760 aaKnown RBP22.77■■□□□ 1.24
PTBP1-219ENST00000621737 SCN10AQ9Y5Y9 1956 aa22.77■■□□□ 1.24
PTBP1-219ENST00000621737 GH1P01241 217 aa22.76■■□□□ 1.23
PTBP1-219ENST00000621737 RXRAP19793 462 aa22.76■■□□□ 1.23
PTBP1-219ENST00000621737 ARHGAP1Q07960 439 aa22.76■■□□□ 1.23
PTBP1-219ENST00000621737 PGM5Q15124 567 aa22.76■■□□□ 1.23
PTBP1-219ENST00000621737 B4GALT4O60513 344 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 KRT32Q14532 448 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 LY6KQ17RY6 165 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 RASEFQ8IZ41 740 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 SRBD1Q8N5C6 995 aaKnown RBP22.75■■□□□ 1.23
PTBP1-219ENST00000621737 PPP1R12CQ9BZL4 782 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 TRPV6Q9H1D0 765 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 ALDH8A1Q9H2A2 487 aaPredicted RBP22.75■■□□□ 1.23
PTBP1-219ENST00000621737 MRVI1Q9Y6F6 885 aa22.75■■□□□ 1.23
PTBP1-219ENST00000621737 MYCLP12524 364 aaPredicted RBP22.74■■□□□ 1.23
PTBP1-219ENST00000621737 EXOSC10Q01780 885 aaKnown RBP22.74■■□□□ 1.23
PTBP1-219ENST00000621737 PPIGQ13427 754 aaKnown RBP eCLIP22.74■■□□□ 1.233e-8■□□□□ 11.2
PTBP1-219ENST00000621737 DHX32Q7L7V1 743 aaKnown RBP22.74■■□□□ 1.23
PTBP1-219ENST00000621737 VSIG10LQ86VR7 867 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms