RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
VPS11-208ENST00000621676 SOX10P56693 466 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
VPS11-208ENST00000621676 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 PGK2P07205 417 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 NLRP12P59046 1061 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 FSTL1Q12841 308 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 STK4Q13043 487 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
VPS11-208ENST00000621676 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 CACTINQ8WUQ7 758 aaKnown RBP11.84□□□□□ -0.51
VPS11-208ENST00000621676 TAAR1Q96RJ0 339 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 EDIL3O43854 480 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 CYP2C8P10632 490 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 ZNF75DP51815 510 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 FANCCQ00597 558 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 CRACR2AQ9BSW2 395 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 HERC5Q9UII4 1024 aaKnown RBP11.84□□□□□ -0.51
VPS11-208ENST00000621676 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
VPS11-208ENST00000621676 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.52
VPS11-208ENST00000621676 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
VPS11-208ENST00000621676 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 FGFBP2Q9BYJ0 223 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 TMX2Q9Y320 296 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
VPS11-208ENST00000621676 PRCPP42785 496 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 VGLL4Q14135 290 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 TRIM47Q96LD4 638 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 MED15Q96RN5 788 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 DISC1Q9NRI5 854 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 FZD9O00144 591 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 OPLAHO14841 1288 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 CTAGE5O15320 804 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
VPS11-208ENST00000621676 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 NAALADL2Q58DX5 795 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 SEPT14Q6ZU15 432 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 HAS1Q92839 578 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
VPS11-208ENST00000621676 RREB1Q92766 1687 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
VPS11-208ENST00000621676 EML1O00423 815 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 HERC4Q5GLZ8 1057 aaPredicted RBP11.82□□□□□ -0.52
VPS11-208ENST00000621676 ATL3Q6DD88 541 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 LZTS2Q9BRK4 669 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 HOOK1Q9UJC3 728 aaKnown RBP11.82□□□□□ -0.52
VPS11-208ENST00000621676 ARID5AQ03989 594 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 C4orf32Q8N8J7 132 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 ANKS1AQ92625 1134 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 DESI2Q9BSY9 194 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
VPS11-208ENST00000621676 CCDC39Q9UFE4 941 aa11.82□□□□□ -0.52
VPS11-208ENST00000621676 USP27XA6NNY8 438 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
VPS11-208ENST00000621676 APBA1Q02410 837 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 FERMT2Q96AC1 680 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 ZBTB10Q96DT7 871 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 TRERF1Q96PN7 1200 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 KCNF1Q9H3M0 494 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS11-208ENST00000621676 TFR2Q9UP52 801 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 V9GYY5 206 aaPredicted RBP11.81□□□□□ -0.52
VPS11-208ENST00000621676 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
VPS11-208ENST00000621676 PTPRAP18433 802 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 MYL5Q02045 173 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
VPS11-208ENST00000621676 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 EHD4Q9H223 541 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 CSADQ9Y600 493 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 MYH1P12882 1939 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 MYMKA6NI61 221 aa11.81□□□□□ -0.52
VPS11-208ENST00000621676 N4BP3O15049 544 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms