RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 SDF4Q9BRK5 362 aa18.04■□□□□ 0.48
CBWD3-216ENST00000621396 TEX13BQ9BXU2 312 aa18.04■□□□□ 0.48
CBWD3-216ENST00000621396 FOXN1O15353 648 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 ECM2O94769 699 aaPredicted RBP18.03■□□□□ 0.48
CBWD3-216ENST00000621396 BMP15O95972 392 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
CBWD3-216ENST00000621396 LBX2Q6XYB7 198 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 HAS1Q92839 578 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 TAAR1Q96RJ0 339 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 CEP350Q5VT06 3117 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 SREBF1P36956 1147 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 TRAF1Q13077 416 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 CCL15Q16663 113 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 Q3C1V9 767 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 RNF207Q6ZRF8 634 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 GRAMD1CQ8IYS0 662 aa18.03■□□□□ 0.48
CBWD3-216ENST00000621396 DDX19AQ9NUU7 478 aaKnown RBP18.03■□□□□ 0.48
CBWD3-216ENST00000621396 POTEMA6NI47 508 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 EIF2AK2P19525 551 aaKnown RBP18.02■□□□□ 0.48
CBWD3-216ENST00000621396 HSD17B4P51659 736 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 SYTL5Q8TDW5 730 aaPredicted RBP18.02■□□□□ 0.48
CBWD3-216ENST00000621396 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 DHX58Q96C10 678 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 MTMR9Q96QG7 549 aa18.02■□□□□ 0.48
CBWD3-216ENST00000621396 KIF3CO14782 793 aa18.02■□□□□ 0.47
CBWD3-216ENST00000621396 FOSP01100 380 aaPredicted RBP18.02■□□□□ 0.47
CBWD3-216ENST00000621396 ZNF76P36508 570 aa18.02■□□□□ 0.47
CBWD3-216ENST00000621396 FKBP1BP68106 108 aa18.02■□□□□ 0.47
CBWD3-216ENST00000621396 GRM1Q13255 1194 aa18.02■□□□□ 0.47
CBWD3-216ENST00000621396 ARL6IP4Q66PJ3 421 aaKnown RBP18.02■□□□□ 0.47
CBWD3-216ENST00000621396 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.47
CBWD3-216ENST00000621396 STAMQ92783 540 aa18.02■□□□□ 0.47
CBWD3-216ENST00000621396 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.47
CBWD3-216ENST00000621396 BTBD19C9JJ37 291 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 MARCH6O60337 910 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 USP11P51784 963 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 ZNF157P51786 506 aaPredicted RBP18.01■□□□□ 0.47
CBWD3-216ENST00000621396 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
CBWD3-216ENST00000621396 SPRYD7Q5W111 196 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 ZNF579Q8NAF0 562 aaKnown RBP18.01■□□□□ 0.47
CBWD3-216ENST00000621396 PTPN18Q99952 460 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 RBPJLQ9UBG7 517 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 SAPCD2Q86UD0 394 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 NCAPG2Q86XI2 1143 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 FAM43AQ8N2R8 423 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 LENG9Q96B70 501 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 A1CFQ9NQ94 594 aaKnown RBP18.01■□□□□ 0.47
CBWD3-216ENST00000621396 SERTAD1Q9UHV2 236 aa18.01■□□□□ 0.47
CBWD3-216ENST00000621396 PDHXO00330 501 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 FDX1P10109 184 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 CASP1P29466 404 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 ZNF445P59923 1031 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 ISM2Q6H9L7 571 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 MCF2L2Q86YR7 1114 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 RNF214Q8ND24 703 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 CNMDO75829 334 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 LRSAM1Q6UWE0 723 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 CNNM3Q8NE01 707 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 PKD2L1Q9P0L9 805 aa18■□□□□ 0.47
CBWD3-216ENST00000621396 OAZ1P54368 228 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 PNOCQ13519 176 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 WDR78Q5VTH9 848 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 SMCR8Q8TEV9 937 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-216ENST00000621396 RMDN3Q96TC7 470 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 MYCLP12524 364 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-216ENST00000621396 GTF2A2P52657 109 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 RASSF8Q8NHQ8 419 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
CBWD3-216ENST00000621396 MOV10L1Q9BXT6 1211 aaKnown RBP17.99■□□□□ 0.47
CBWD3-216ENST00000621396 FAM237AA0A1B0GTK4 181 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 BIN1O00499 593 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 LAD1O00515 517 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 CETPP11597 493 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 LONP1P36776 959 aaKnown RBP17.98■□□□□ 0.47
CBWD3-216ENST00000621396 AFMP43652 599 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 CNTN2Q02246 1040 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 LRRC15Q8TF66 581 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 CYP39A1Q9NYL5 469 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 LOC285556D6RIA3 1793 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 IGLV3-22A0A075B6J6 115 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 MSH4O15457 936 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ITGB5P18084 799 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ERCC3P19447 782 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 PRPHP41219 470 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 ANKRD13CQ8N6S4 541 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 WDR11Q9BZH6 1224 aa17.98■□□□□ 0.47
CBWD3-216ENST00000621396 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
CBWD3-216ENST00000621396 PRR29P0C7W0 189 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms