RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TBC1D5Q92609 795 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.69■□□□□ 0.58
CD40-207ENST00000620709 TRPV6Q9H1D0 765 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
CD40-207ENST00000620709 ABCB11O95342 1321 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 B4DLN1 442 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 MRPL12P52815 198 aaKnown RBP18.68■□□□□ 0.58
CD40-207ENST00000620709 PPP2R5BQ15173 497 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 QRICH1Q2TAL8 776 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 CYB5R4Q7L1T6 521 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 FBXO11Q86XK2 927 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 DNERQ8NFT8 737 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 SEMA6BQ9H3T3 888 aa18.68■□□□□ 0.58
CD40-207ENST00000620709 GRIN2DO15399 1336 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 MYH6P13533 1939 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 LOC102724159A0A0B4J2E5 919 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 CD4P01730 458 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 CPT1AP50416 773 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 NEK4P51957 841 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 CHMP4BP1P59074 171 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 PWP2Q15269 919 aaKnown RBP18.67■□□□□ 0.58
CD40-207ENST00000620709 TSGA10IPQ3SY00 556 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 COPS5Q92905 334 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 HIPK3Q9H422 1215 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 POLR3EQ9NVU0 708 aa18.67■□□□□ 0.58
CD40-207ENST00000620709 A0A0C4DFX4 3053 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
CD40-207ENST00000620709 B4GALT4O60513 344 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 CCL23P55773 120 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 KRT32Q14532 448 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 BRDTQ58F21 947 aaPredicted RBP18.66■□□□□ 0.58
CD40-207ENST00000620709 FAM47CQ5HY64 1035 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 STAG2Q8N3U4 1231 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 SCFD2Q8WU76 684 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 TAAR1Q96RJ0 339 aa18.66■□□□□ 0.58
CD40-207ENST00000620709 CDX2Q99626 313 aaPredicted RBP18.66■□□□□ 0.58
CD40-207ENST00000620709 RBM47A0AV96 593 aaKnown RBP18.65■□□□□ 0.58
CD40-207ENST00000620709 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
CD40-207ENST00000620709 TXNP10599 105 aaKnown RBP18.65■□□□□ 0.58
CD40-207ENST00000620709 PSMA5P28066 241 aa18.65■□□□□ 0.58
CD40-207ENST00000620709 SEPT14Q6ZU15 432 aa18.65■□□□□ 0.58
CD40-207ENST00000620709 MCF2L2Q86YR7 1114 aa18.65■□□□□ 0.58
CD40-207ENST00000620709 RGS22Q8NE09 1264 aa18.65■□□□□ 0.58
CD40-207ENST00000620709 JAKMIP1Q96N16 626 aaKnown RBP18.65■□□□□ 0.58
CD40-207ENST00000620709 MRPL11Q9Y3B7 192 aaKnown RBP18.65■□□□□ 0.58
CD40-207ENST00000620709 UMODL1Q5DID0 1318 aa18.65■□□□□ 0.58
CD40-207ENST00000620709 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 ERICH2A1L162 156 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 KLRF2D3W0D1 207 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 CFBP00751 764 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 EDNRBP24530 442 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 MCM2P49736 904 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 TTLL4Q14679 1199 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 TMEM240Q5SV17 173 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 ZNF365Q70YC5 407 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 C16orf59Q7L2K0 433 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 RALYLQ86SE5 291 aaKnown RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 SYTL5Q8TDW5 730 aaPredicted RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 MYLIPQ8WY64 445 aa18.64■□□□□ 0.58
CD40-207ENST00000620709 MTG1Q9BT17 334 aaPredicted RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 UPF3BQ9BZI7 483 aaKnown RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 TTYH1Q9H313 450 aaPredicted RBP18.64■□□□□ 0.58
CD40-207ENST00000620709 DLL1O00548 723 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 NKRFO15226 690 aaKnown RBP eCLIP18.64■□□□□ 0.57
CD40-207ENST00000620709 CYP21A2P08686 494 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
CD40-207ENST00000620709 SEC23AQ15436 765 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 ARHGEF16Q5VV41 709 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
CD40-207ENST00000620709 RMDN3Q96TC7 470 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 IL23AQ9NPF7 189 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 TRMT13Q9NUP7 481 aaKnown RBP18.64■□□□□ 0.57
CD40-207ENST00000620709 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
CD40-207ENST00000620709 EIF2AK2P19525 551 aaKnown RBP18.63■□□□□ 0.57
CD40-207ENST00000620709 PURAQ00577 322 aaKnown RBP18.63■□□□□ 0.57
CD40-207ENST00000620709 ADCK5Q3MIX3 580 aa18.63■□□□□ 0.57
CD40-207ENST00000620709 PSRC1Q6PGN9 363 aaPredicted RBP18.63■□□□□ 0.57
CD40-207ENST00000620709 AMNQ9BXJ7 453 aa18.63■□□□□ 0.57
CD40-207ENST00000620709 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
CD40-207ENST00000620709 ALDH8A1Q9H2A2 487 aaPredicted RBP18.63■□□□□ 0.57
CD40-207ENST00000620709 ZSWIM6Q9HCJ5 1215 aa18.63■□□□□ 0.57
CD40-207ENST00000620709 CYP46A1Q9Y6A2 500 aa18.63■□□□□ 0.57
CD40-207ENST00000620709 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 ARIH2O95376 493 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 CYP2C9P11712 490 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 DNAJB2P25686 324 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 WTAPQ15007 396 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 STXBP2Q15833 593 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 NBPF20Q3BBV1 942 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
CD40-207ENST00000620709 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
CD40-207ENST00000620709 TAF6LQ9Y6J9 622 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms