RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RBM12Q9NTZ6 932 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SASH1O94885 1247 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ADCY2Q08462 1091 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CYLDQ9NQC7 956 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ZFP69BQ9UJL9 534 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 E2F8A0AVK6 867 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TOM1L1O75674 476 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SARM1Q6SZW1 724 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TMEM87AQ8NBN3 555 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 RAPGEF4Q8WZA2 1011 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TSNARE1Q96NA8 513 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 RPS6KC1Q96S38 1066 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 METTL5Q9NRN9 209 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 MAGED2Q9UNF1 606 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CHMP2AO43633 222 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 GFAPP14136 432 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 PECAM1P16284 738 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 PAX3P23760 479 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ITIH3Q06033 890 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SPICE1Q8N0Z3 855 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 E7EWF7 191 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 DDHD2O94830 711 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 FGFR4P22455 802 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 FAM81AQ8TBF8 368 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ATP2A3Q93084 1043 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CCDC124Q96CT7 223 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CHP1Q99653 195 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM49BA6NDI0 452 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SART1O43290 800 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 MTA3Q9BTC8 594 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 AGTPBP1Q9UPW5 1226 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ZWINTO95229 277 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ANKRD20A8PQ5CZ79 823 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SRRM1Q8IYB3 904 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ANAPC5Q9UJX4 755 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 DNAJC8O75937 253 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 KRT75O95678 551 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CACNA2D1P54289 1103 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CASC4Q6P4E1 433 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 SUGP1Q8IWZ8 645 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ABCF3Q9NUQ8 709 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 THEGQ9P2T0 379 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 NQO1P15559 274 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 EPHB1P54762 984 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ATP6V0A4Q9HBG4 840 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 NPHS2Q9NP85 383 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 DDX28Q9NUL7 540 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 LINC00854A0A1B0GVQ3 168 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 M0R2C6 588 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CASP2P42575 452 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 LRRC27Q9C0I9 530 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ANKZF1Q9H8Y5 726 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 CNOT10Q9H9A5 744 aaKnown RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ASXL1Q8IXJ9 1541 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 ATP2A1O14983 1001 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 FLOT1O75955 427 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 COPB2P35606 906 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 KAT2BQ92831 832 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 OSBPL9Q96SU4 736 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM51Q9BSJ1 452 aa5.48□□□□□ -1.53
VPS13D-214ENST00000620676 DBF4Q9UBU7 674 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-214ENST00000620676 F5H423 210 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 IRF6O14896 467 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 CRCPO75575 148 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 MESDQ14696 234 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 ZNF653Q96CK0 615 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 OPTNQ96CV9 577 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 ZBED2Q9BTP6 218 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 DAPK3O43293 454 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 SEPT2Q15019 361 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 RASSF3Q86WH2 238 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 SLC26A7Q8TE54 656 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 DDX50Q9BQ39 737 aaKnown RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 DBNDD2Q9BQY9 259 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 RPS6P62753 249 aaKnown RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 RAD9BQ6WBX8 426 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 CCHCR1Q8TD31 782 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 XPO6Q96QU8 1125 aaKnown RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 GORASP1Q9BQQ3 440 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 TRPV6Q9H1D0 765 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 ABHD10Q9NUJ1 306 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 CACNB1Q02641 598 aaPredicted RBP5.47□□□□□ -1.53
VPS13D-214ENST00000620676 P3H1Q32P28 736 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 KIFAP3Q92845 792 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 FAM210AQ96ND0 272 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 INPP5FQ9Y2H2 1132 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 A8MUI8 341 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 TNNI2P48788 182 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 TTBK2Q6IQ55 1244 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 TMTC3Q6ZXV5 915 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 KRT26Q7Z3Y9 468 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 RPGRIP1Q96KN7 1286 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 FAM161BQ96MY7 647 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 C19orf44Q9H6X5 657 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 ZNF229Q9UJW7 825 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 CYP2J2P51589 502 aa5.47□□□□□ -1.53
VPS13D-214ENST00000620676 MAPK10P53779 464 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms