RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 KIAA0825Q8IV33 1275 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ATP6V1G3Q96LB4 118 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 PICK1Q9NRD5 415 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 PCMTD2Q9NV79 361 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS11-207ENST00000620429 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 N4BP3O15049 544 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 PENKP01210 267 aaPredicted RBP11.44□□□□□ -0.58
VPS11-207ENST00000620429 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
VPS11-207ENST00000620429 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 KCNH3Q9ULD8 1083 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 SLC12A4Q9UP95 1085 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 FOXN1O15353 648 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 KRT14P02533 472 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 FGAP02671 866 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 BMP6P22004 513 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ANTXR2P58335 489 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 PTPAQ15257 358 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
VPS11-207ENST00000620429 CMPK2Q5EBM0 449 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ANKRD20A2Q5SQ80 823 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ANKRD20A1Q5TYW2 823 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ANKRD20A3Q5VUR7 823 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 KRT40Q6A162 431 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
VPS11-207ENST00000620429 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
VPS11-207ENST00000620429 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
VPS11-207ENST00000620429 ZMYM6O95789 1325 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 EYA2O00167 538 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 ATP1A1P05023 1023 aaKnown RBP11.43□□□□□ -0.58
VPS11-207ENST00000620429 PSMC4P43686 418 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 SEPT2Q15019 361 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 QPCTQ16769 361 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 NAF1Q96HR8 494 aaKnown RBP11.43□□□□□ -0.58
VPS11-207ENST00000620429 ZCWPW1Q9H0M4 648 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 PIDD1Q9HB75 910 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 PPANQ9NQ55 473 aaKnown RBP11.43□□□□□ -0.58
VPS11-207ENST00000620429 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 PAEPP09466 180 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 RXRAP19793 462 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 YY1P25490 414 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
VPS11-207ENST00000620429 AGAP3Q96P47 875 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 PANK4Q9NVE7 773 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 GMEB1Q9Y692 573 aa11.43□□□□□ -0.58
VPS11-207ENST00000620429 FOXP2O15409 715 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 CLTAP09496 248 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ADORA1P30542 326 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 IL15P40933 162 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 PABPC4Q13310 644 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■□□□□ 9.5
VPS11-207ENST00000620429 DDB1Q16531 1140 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 CFAP58Q5T655 872 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 GKAP1Q5VSY0 366 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 MREGQ8N565 214 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 MAIP1Q8WWC4 291 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 JAKMIP2Q96AA8 810 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 GPR108Q9NPR9 543 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 BIN2Q9UBW5 565 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ANO9A1A5B4 782 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ZNF213O14771 459 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 RPL13P26373 211 aaKnown RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 POLD1P28340 1107 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ERVK-24P63145 666 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 FMR1Q06787 632 aaKnown RBP eCLIP11.42□□□□□ -0.583e-6■■□□□ 13.5
VPS11-207ENST00000620429 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 CYP26C1Q6V0L0 522 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ZNF662Q6ZS27 426 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 LCA5Q86VQ0 697 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 PHKBQ93100 1093 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 MAP3K14Q99558 947 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 FAM167BQ9BTA0 163 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 PHACTR1Q9C0D0 580 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 ATXN10Q9UBB4 475 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 PPP1R1BQ9UD71 204 aaPredicted RBP11.42□□□□□ -0.58
VPS11-207ENST00000620429 SLC12A6Q9UHW9 1150 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 MAN1B1Q9UKM7 699 aa11.42□□□□□ -0.58
VPS11-207ENST00000620429 MYH8P13535 1937 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 ITIH6Q6UXX5 1313 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 LRRC10BA6NIK2 292 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 PDE2AO00408 941 aaPredicted RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 ENC1O14682 589 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 SRGAP2O75044 1071 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms