RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 NONOQ15233 471 aaKnown RBP eCLIP17.82■□□□□ 0.442e-7■□□□□ 10.1
DKC1-213ENST00000620277 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 SPATA4Q8NEY3 305 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 FGFBP2Q9BYJ0 223 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 RBM12Q9NTZ6 932 aaKnown RBP17.82■□□□□ 0.44
DKC1-213ENST00000620277 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 LRP6O75581 1613 aa17.82■□□□□ 0.44
DKC1-213ENST00000620277 CCDC40Q4G0X9 1142 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 MTMR8Q96EF0 704 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 CALML4Q96GE6 196 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 ARPP21Q9UBL0 812 aaPredicted RBP17.81■□□□□ 0.44
DKC1-213ENST00000620277 SEC63Q9UGP8 760 aaKnown RBP17.81■□□□□ 0.44
DKC1-213ENST00000620277 NFU1Q9UMS0 254 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 LMTK3Q96Q04 1460 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 RCAN1P53805 252 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 C12orf60Q5U649 245 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 CREG2Q8IUH2 290 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 SNX29Q8TEQ0 813 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 EYA3Q99504 573 aa17.81■□□□□ 0.44
DKC1-213ENST00000620277 ORC4O43929 436 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 IVLP07476 585 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 FAM153BP0C7A2 387 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 VAV2P52735 878 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 EHHADHQ08426 723 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 FAM153CQ494X1 144 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 SV2BQ7L1I2 683 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 OSBPL9Q96SU4 736 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 FAM153AQ9UHL3 310 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 NID2Q14112 1375 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 GNPATO15228 680 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 POLR2FP61218 127 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 GUCY2DQ02846 1103 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 CKAP4Q07065 602 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 PAPD7Q5XG87 772 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 WDR93Q6P2C0 686 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 CARSP49589 748 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 SNAP25P60880 206 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 RAPGEF1Q13905 1077 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 FAM98CQ17RN3 349 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 AMOTL1Q8IY63 956 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 MMTAG2Q9BU76 263 aaKnown RBP17.8■□□□□ 0.44
DKC1-213ENST00000620277 PACSIN1Q9BY11 444 aa17.8■□□□□ 0.44
DKC1-213ENST00000620277 TAL1P17542 331 aaPredicted RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 HPDP32754 393 aaPredicted RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 PDE4CQ08493 712 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 EPB41L5Q9HCM4 733 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 MED4Q9NPJ6 270 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 BCCIPQ9P287 314 aaKnown RBP eCLIP17.79■□□□□ 0.44
DKC1-213ENST00000620277 ADAMTS1Q9UHI8 967 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 SNX12Q9UMY4 172 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 PRPF6O94906 941 aaKnown RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 FECHP22830 423 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 CALCRLQ16602 461 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 CT47A1Q5JQC4 288 aaPredicted RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 C8orf74Q6P047 294 aa17.79■□□□□ 0.44
DKC1-213ENST00000620277 TRMT1LQ7Z2T5 733 aaKnown RBP17.79■□□□□ 0.44
DKC1-213ENST00000620277 TUBB2AQ13885 445 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 VWA3BQ502W6 1294 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 DDX12PQ92771 950 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 KRT12Q99456 494 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 MTA3Q9BTC8 594 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 TUBB2BQ9BVA1 445 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 PSD3Q9NYI0 1048 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 MYH3P11055 1940 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 A0A1W2PQC6 194 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 PAFAH1B1P43034 410 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 HLTFQ14527 1009 aaKnown RBP eCLIP17.78■□□□□ 0.44
DKC1-213ENST00000620277 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 TTYH3Q9C0H2 523 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 BICDL2A1A5D9 508 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 RASA1P20936 1047 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 ADAT2Q7Z6V5 191 aaKnown RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 TBC1D5Q92609 795 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 DHTKD1Q96HY7 919 aaPredicted RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
DKC1-213ENST00000620277 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
DKC1-213ENST00000620277 GLI1P08151 1106 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 ACTN1P12814 892 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 BTDP43251 543 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 NOP2P46087 812 aaKnown RBP17.77■□□□□ 0.44
DKC1-213ENST00000620277 IRAK1P51617 712 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms