RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
PSMC3-213ENST00000619920 ENOX1Q8TC92 643 aaKnown RBP17.25■□□□□ 0.35
PSMC3-213ENST00000619920 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
PSMC3-213ENST00000619920 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 VCAM1P19320 739 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 CASP1P29466 404 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 AMPD3Q01432 767 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 SPP2Q13103 211 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 STAMQ92783 540 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
PSMC3-213ENST00000619920 C12orf42Q96LP6 360 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 EHMT1Q9H9B1 1298 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 STK17AQ9UEE5 414 aa17.24■□□□□ 0.35
PSMC3-213ENST00000619920 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 KCNB1Q14721 858 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 SAMD3Q8N6K7 520 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 BLZF1Q9H2G9 400 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 ZNF536O15090 1300 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 CFBP00751 764 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 GHRHRQ02643 423 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 GRB10Q13322 594 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 DRC7Q8IY82 874 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 C7orf25Q9BPX7 421 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 HSD3B7Q9H2F3 369 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
PSMC3-213ENST00000619920 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 ZHX2Q9Y6X8 837 aa17.23■□□□□ 0.35
PSMC3-213ENST00000619920 SSC5DA1L4H1 1573 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 POTEMA6NI47 508 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 FLOT1O75955 427 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 ZNF658Q5TYW1 1059 aaPredicted RBP17.22■□□□□ 0.35
PSMC3-213ENST00000619920 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 MCF2L2Q86YR7 1114 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 LRRC15Q8TF66 581 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 LENG9Q96B70 501 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 PLIN2Q99541 437 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
PSMC3-213ENST00000619920 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
PSMC3-213ENST00000619920 ZBED4O75132 1171 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 USP2O75604 605 aaPredicted RBP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 HSD17B4P51659 736 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 PRR16Q569H4 304 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 HYIQ5T013 277 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 SULF1Q8IWU6 871 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 SPC24Q8NBT2 197 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
PSMC3-213ENST00000619920 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 LRRC27Q9C0I9 530 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.35
PSMC3-213ENST00000619920 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 CBFA2T2O43439 604 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 ZNF76P36508 570 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 FANCCQ00597 558 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
PSMC3-213ENST00000619920 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
PSMC3-213ENST00000619920 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
PSMC3-213ENST00000619920 CTDP1Q9Y5B0 961 aaPredicted RBP17.2■□□□□ 0.34
PSMC3-213ENST00000619920 KLRC4O43908 158 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
PSMC3-213ENST00000619920 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 SPATA1Q5VX52 437 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 CNNM4Q6P4Q7 775 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
PSMC3-213ENST00000619920 CLEC4DQ8WXI8 215 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 TRIM9Q9C026 710 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 RRAGDQ9NQL2 400 aaPredicted RBP17.19■□□□□ 0.34
PSMC3-213ENST00000619920 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 NFE2L3Q9Y4A8 694 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
PSMC3-213ENST00000619920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
PSMC3-213ENST00000619920 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
PSMC3-213ENST00000619920 ZNF18P17022 549 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms