RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 PDGFCQ9NRA1 345 aa12.74□□□□□ -0.37
GAPDH-211ENST00000619601 PNMA6FA0A0J9YX94 578 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 CTAGE5O15320 804 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
GAPDH-211ENST00000619601 DYNC1LI2O43237 492 aaPredicted RBP12.73□□□□□ -0.37
GAPDH-211ENST00000619601 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
GAPDH-211ENST00000619601 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 LIFRP42702 1097 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 GNAQP50148 359 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 CPT1AP50416 773 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 GHRHRQ02643 423 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
GAPDH-211ENST00000619601 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
GAPDH-211ENST00000619601 ARVCFO00192 962 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
GAPDH-211ENST00000619601 CFBP00751 764 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 CDK7P50613 346 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 HSD17B4P51659 736 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 BEX3Q00994 111 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 KRT32Q14532 448 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 TTLL4Q14679 1199 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 STXBP2Q15833 593 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 ZNF654Q8IZM8 581 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 SPZ1Q9BXG8 430 aa12.72□□□□□ -0.37
GAPDH-211ENST00000619601 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
GAPDH-211ENST00000619601 KPNA6O60684 536 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
GAPDH-211ENST00000619601 RAG1P15918 1043 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 ITGB8P26012 769 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-211ENST00000619601 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 ZNF697Q5TEC3 545 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.37
GAPDH-211ENST00000619601 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 PIGSQ96S52 555 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 SENP2Q9HC62 589 aa12.71□□□□□ -0.37
GAPDH-211ENST00000619601 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-211ENST00000619601 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
GAPDH-211ENST00000619601 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-211ENST00000619601 CYTH3O43739 400 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-211ENST00000619601 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
GAPDH-211ENST00000619601 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
GAPDH-211ENST00000619601 SKAP1Q86WV1 359 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 PXMP2Q9NR77 195 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 SLC12A7Q9Y666 1083 aa12.7□□□□□ -0.38
GAPDH-211ENST00000619601 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
GAPDH-211ENST00000619601 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 A6NJR5 290 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 OPLAHO14841 1288 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 TIMP1P01033 207 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 NR3C2P08235 984 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 EPHB4P54760 987 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
GAPDH-211ENST00000619601 FPGSQ05932 587 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 ITGA7Q13683 1181 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 ERICH6BQ5W0A0 696 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 SGMS1Q86VZ5 419 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 CDX2Q99626 313 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-211ENST00000619601 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-211ENST00000619601 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
GAPDH-211ENST00000619601 CDH23Q9H251 3354 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 REC8O95072 547 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 GH1P01241 217 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 CD4P01730 458 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
GAPDH-211ENST00000619601 PURAQ00577 322 aaKnown RBP12.68□□□□□ -0.38
GAPDH-211ENST00000619601 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 SEPT14Q6ZU15 432 aa12.68□□□□□ -0.38
GAPDH-211ENST00000619601 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
GAPDH-211ENST00000619601 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
GAPDH-211ENST00000619601 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
GAPDH-211ENST00000619601 STAM2O75886 525 aa12.67□□□□□ -0.38
GAPDH-211ENST00000619601 MYL3P08590 195 aa12.67□□□□□ -0.38
GAPDH-211ENST00000619601 SUPT20HL2P0C7V6 817 aa12.67□□□□□ -0.38
GAPDH-211ENST00000619601 TGFB3P10600 412 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms