RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 UBN1Q9NPG3 1134 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 GOLGA8CPA6NN73 597 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 ECEL1O95672 775 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 ALKBH8Q96BT7 664 aaKnown RBP15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.11
PTPN9-206ENST00000618819 CHUKO15111 745 aa15.71■□□□□ 0.1
PTPN9-206ENST00000618819 KRT75O95678 551 aa15.71■□□□□ 0.1
PTPN9-206ENST00000618819 KRT4P19013 534 aa15.71■□□□□ 0.1
PTPN9-206ENST00000618819 RFX1P22670 979 aa15.71■□□□□ 0.1
PTPN9-206ENST00000618819 NSFP46459 744 aaKnown RBP15.71■□□□□ 0.1
PTPN9-206ENST00000618819 TBCCQ15814 346 aa15.71■□□□□ 0.1
PTPN9-206ENST00000618819 PPARGC1AQ9UBK2 798 aaKnown RBP15.71■□□□□ 0.1
PTPN9-206ENST00000618819 NOC2LQ9Y3T9 749 aaKnown RBP15.71■□□□□ 0.1
PTPN9-206ENST00000618819 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-206ENST00000618819 RASGRF2O14827 1237 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 LIG4P49917 911 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 PYGLP06737 847 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 VCAM1P19320 739 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 DDX42Q86XP3 938 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTPN9-206ENST00000618819 AP1M1Q9BXS5 423 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 PIK3CAP42336 1068 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 PSMD2Q13200 908 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 ME3Q16798 604 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 ACRBPQ8NEB7 543 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 DYTNA2CJ06 578 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 H0YC42 278 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 CAPRIN1Q14444 709 aaKnown RBP15.7■□□□□ 0.1
PTPN9-206ENST00000618819 CCNYQ8ND76 341 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 TTI1O43156 1089 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 NDUFA8P51970 172 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 BEND6Q5SZJ8 279 aaPredicted RBP15.7■□□□□ 0.1
PTPN9-206ENST00000618819 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
PTPN9-206ENST00000618819 ACSL3O95573 720 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 COPB1P53618 953 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 DISC1Q9NRI5 854 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 CEP55Q53EZ4 464 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 SZRD1Q7Z422 152 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 WASLO00401 505 aaPredicted RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 RPN1P04843 607 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 OLFML2BQ68BL8 750 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 CACTINQ8WUQ7 758 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 ENO4A6NNW6 628 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 FBXO18Q8NFZ0 1043 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 SH3GL2Q99962 352 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 PITPNM3Q9BZ71 974 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 NEUROG2Q9H2A3 272 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 SOWAHDA6NJG2 315 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 ADAM9Q13443 819 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 SLC9A5Q14940 896 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 PUM3Q15397 648 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 FAM47AQ5JRC9 791 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 FAM47EQ6ZV65 393 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 ZFYVE19Q96K21 471 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 HSPA8P11142 646 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 CA4P22748 312 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 THOC5Q13769 683 aaKnown RBP15.69■□□□□ 0.1
PTPN9-206ENST00000618819 TTC17Q96AE7 1141 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 KIF17Q9P2E2 1029 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 MKL2Q9ULH7 1088 aa15.69■□□□□ 0.1
PTPN9-206ENST00000618819 SEC24DO94855 1032 aaPredicted RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TNNC2P02585 160 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 MMEP08473 750 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 MYO1EQ12965 1108 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 CNOT6LQ96LI5 555 aaKnown RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 ASCC2Q9H1I8 757 aaPredicted RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 KCNA1Q09470 495 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 FBXO38Q6PIJ6 1188 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 MAPK4P31152 587 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 SLC1A4P43007 532 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TMCO5AQ8N6Q1 288 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 PAIP2BQ9ULR5 123 aaKnown RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 ITM2BQ9Y287 266 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 PI4K2BG5E9Z4 385 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 PYGBP11216 843 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 NAF1Q96HR8 494 aaKnown RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 GINM1Q9NU53 330 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TMOD4Q9NZQ9 345 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TNNI3KQ59H18 835 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 NT5C3AQ9H0P0 336 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 ZFP69BQ9UJL9 534 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 FPGT-TNNI3KV9GXZ4 949 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 GAS7O60861 476 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 DCTN3O75935 186 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 SEPT2Q15019 361 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 DARS2Q6PI48 645 aaKnown RBP15.68■□□□□ 0.1
PTPN9-206ENST00000618819 TTC1Q99614 292 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms