RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SH3GLB2Q9NR46 395 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BSDC1Q9NW68 430 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 STK32BQ9NY57 414 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TMOD4Q9NZQ9 345 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 AFG3L2Q9Y4W6 797 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 MT-ND3P03897 115 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 HSPA6P17066 643 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RHBDL3P58872 404 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ARL6IP4Q66PJ3 421 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 SLC35F6Q8N357 371 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 GBP7Q8N8V2 638 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 SNX29Q8TEQ0 813 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RSAD2Q8WXG1 361 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 L3MBTL3Q96JM7 780 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 SAMSN1Q9NSI8 373 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 VPS54Q9P1Q0 977 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 H0YCG3 227 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 HSPA8P11142 646 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 RXRBP28702 533 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BRINP3Q76B58 766 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BLIDQ8IZY5 108 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.33□□□□□ -1.88
LPP-221ENST00000618621 MORC4Q8TE76 937 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 LMNAP02545 664 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 YWHAEP62258 255 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 KIF23Q02241 960 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 RAD51AP2Q09MP3 1159 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 KRT81Q14533 505 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 DBN1Q16643 649 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 NBPF9Q3BBW0 867 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 SLC39A2Q9NP94 309 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PARP3Q9Y6F1 533 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ZFYVE9O95405 1425 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PPP1R21Q6ZMI0 780 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TBC1D31Q96DN5 1066 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 DDX27Q96GQ7 796 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 MLPHQ9BV36 600 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 THEGQ9P2T0 379 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ARMCX3Q9UH62 379 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 ADGRG1Q9Y653 693 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PABPN1LA6NDY0 278 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 RCAN1P53805 252 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BFSP1Q12934 665 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 KRT31Q15323 416 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 EPHA10Q5JZY3 1008 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 USPL1Q5W0Q7 1092 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 NCAPH2Q6IBW4 605 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 CCNI2Q6ZMN8 369 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 PPP1R14AQ96A00 147 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ZMYND12Q9H0C1 365 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BAIAP2L1Q9UHR4 511 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RABGAP1Q9Y3P9 1069 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RPS6KL1Q9Y6S9 549 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 FLT4P35916 1363 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 WDR62O43379 1518 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 MYO1FO00160 1098 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 SMIM24O75264 130 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BBOX1O75936 387 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PDE6BP35913 854 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RPS6KA2Q15349 733 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PTPN21Q16825 1174 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RASIP1Q5U651 963 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PPP1R14DQ9NXH3 145 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ANAPC5Q9UJX4 755 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 SYNRGQ9UMZ2 1314 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 AFPP02771 609 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 IRAK1P51617 712 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RASA3Q14644 834 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ZKSCAN8Q15776 578 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 DOK7Q18PE1 504 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 HSP90AA5PQ58FG0 334 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TADA2BQ86TJ2 420 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 MRPL11Q9Y3B7 192 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 DHX9Q08211 1270 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 CCDC17Q96LX7 622 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 VPS37BQ9H9H4 285 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ZNF277Q9NRM2 450 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 PNMA6FA0A0J9YX94 578 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PODXLO00592 558 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 GRK7Q8WTQ7 553 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 HAUS1Q96CS2 278 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 P4HA1P13674 534 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ATP1A2P50993 1020 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MAP3K7CLP57077 242 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 HADHQ16836 314 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 CCDC93Q567U6 631 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 BEND6Q5SZJ8 279 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 THAP12O43422 761 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SLC26A4O43511 780 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ERCC3P19447 782 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 INF2Q27J81 1249 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SEPT14Q6ZU15 432 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 P2RX5Q93086 422 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 IL17RAQ96F46 866 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 JPH2Q9BR39 696 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 NRBP2Q9NSY0 501 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 USP42Q9H9J4 1324 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 AP5Z1O43299 807 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 DMP1Q13316 513 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms