RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PCDHA6Q9UN73 950 aa25.98■■□□□ 1.75
CBWD3-213ENST00000618217 PCDHA8Q9Y5H6 950 aa25.98■■□□□ 1.75
CBWD3-213ENST00000618217 HTTP42858 3142 aa25.97■■□□□ 1.75
CBWD3-213ENST00000618217 RPTORQ8N122 1335 aa25.97■■□□□ 1.75
CBWD3-213ENST00000618217 TNFRSF25Q93038 417 aa25.97■■□□□ 1.75
CBWD3-213ENST00000618217 FLRT1Q9NZU1 646 aa25.97■■□□□ 1.75
CBWD3-213ENST00000618217 FOSP01100 380 aaPredicted RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 PDCP20941 246 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 ALDH5A1P51649 535 aaPredicted RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 AP3B2Q13367 1082 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 CCL14Q16627 93 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 JAKMIP3Q5VZ66 844 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 MAMDC4Q6UXC1 1216 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 PXMP2Q9NR77 195 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 ADD3Q9UEY8 706 aaKnown RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 BTBD18B2RXH4 712 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 SYT1P21579 422 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 MCTP2Q6DN12 878 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 CTU1Q7Z7A3 348 aaKnown RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 DIS3L2Q8IYB7 885 aaKnown RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 MORC4Q8TE76 937 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 NSUN6Q8TEA1 469 aaKnown RBP25.96■■□□□ 1.75
CBWD3-213ENST00000618217 PTPN22Q9Y2R2 807 aa25.96■■□□□ 1.75
CBWD3-213ENST00000618217 MYH7BA7E2Y1 1941 aa25.95■■□□□ 1.75
CBWD3-213ENST00000618217 EDNRBP24530 442 aa25.95■■□□□ 1.74
CBWD3-213ENST00000618217 KRT2P35908 639 aa25.95■■□□□ 1.74
CBWD3-213ENST00000618217 NR5A1Q13285 461 aa25.95■■□□□ 1.74
CBWD3-213ENST00000618217 OLFML2BQ68BL8 750 aa25.95■■□□□ 1.74
CBWD3-213ENST00000618217 DDX49Q9Y6V7 483 aaKnown RBP25.95■■□□□ 1.74
CBWD3-213ENST00000618217 LRRC37A2A6NM11 1700 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 LOC102724159A0A0B4J2E5 919 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 SPDYE3A6NKU9 549 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 PWP2Q15269 919 aaKnown RBP25.94■■□□□ 1.74
CBWD3-213ENST00000618217 PGBD1Q96JS3 809 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 PDCD2LQ9BRP1 358 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 ANO3Q9BYT9 981 aa25.94■■□□□ 1.74
CBWD3-213ENST00000618217 MSL3Q8N5Y2 521 aaKnown RBP25.93■■□□□ 1.74
CBWD3-213ENST00000618217 IL31RAQ8NI17 732 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 PXYLP1Q8TE99 480 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 CRYGNQ8WXF5 182 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 TRIB2Q92519 343 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 IWS1Q96ST2 819 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 TINF2Q9BSI4 451 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 PTCH2Q9Y6C5 1203 aa25.93■■□□□ 1.74
CBWD3-213ENST00000618217 EIF2AK2P19525 551 aaKnown RBP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 PGM5Q15124 567 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 SAFBQ15424 915 aaKnown RBP eCLIP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 EARS2Q5JPH6 523 aaKnown RBP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 ARHGEF16Q5VV41 709 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 RAET1EQ8TD07 263 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 FOXP1Q9H334 677 aaPredicted RBP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 BRMS1Q9HCU9 246 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 H3BQV1 296 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 ADCY3O60266 1144 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 NR3C2P08235 984 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 U2AF2P26368 475 aaKnown RBP eCLIP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 SREBF1P36956 1147 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 IFFO2Q5TF58 517 aa25.92■■□□□ 1.74
CBWD3-213ENST00000618217 TRMT44Q8IYL2 757 aaKnown RBP25.92■■□□□ 1.74
CBWD3-213ENST00000618217 SYNGAP1Q96PV0 1343 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 ASB14A6NK59 587 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 KIF28PB7ZC32 967 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 EDIL3O43854 480 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 SNAI1O95863 264 aaPredicted RBP25.91■■□□□ 1.74
CBWD3-213ENST00000618217 ELNP15502 786 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 UBXN2AP68543 259 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 ARMCX2Q7L311 632 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 KRT25Q7Z3Z0 450 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 VSIG10LQ86VR7 867 aa25.91■■□□□ 1.74
CBWD3-213ENST00000618217 MTMR6Q9Y217 621 aa25.9■■□□□ 1.74
CBWD3-213ENST00000618217 FAM205CA6NFA0 338 aa25.89■■□□□ 1.74
CBWD3-213ENST00000618217 STX6O43752 255 aa25.89■■□□□ 1.74
CBWD3-213ENST00000618217 PCNX4Q63HM2 1172 aa25.89■■□□□ 1.74
CBWD3-213ENST00000618217 KIAA1217Q5T5P2 1943 aa25.89■■□□□ 1.73
CBWD3-213ENST00000618217 CYP2C19P33261 490 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 DDIT3P35638 169 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 MRPS9P82933 396 aaKnown RBP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 PKN2Q16513 984 aaKnown RBP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 SLAIN1Q8ND83 568 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 KATNBL1Q9H079 304 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 EHMT1Q9H9B1 1298 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 CCDC194A0A1B0GVG4 234 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 VPS37CA5D8V6 355 aaPredicted RBP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 CYP3A4P08684 503 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 ARHGAP4P98171 946 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 NONOQ15233 471 aaKnown RBP eCLIP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 XRRA1Q6P2D8 792 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 FBXO46Q6PJ61 603 aaPredicted RBP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 PIK3AP1Q6ZUJ8 805 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 NOSTRINQ8IVI9 506 aa25.88■■□□□ 1.73
CBWD3-213ENST00000618217 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.88■■□□□ 1.73
CBWD3-213ENST00000618217 B4DLN1 442 aa25.87■■□□□ 1.73
CBWD3-213ENST00000618217 PDIA4P13667 645 aaKnown RBP25.87■■□□□ 1.73
CBWD3-213ENST00000618217 GRK4P32298 578 aa25.87■■□□□ 1.73
CBWD3-213ENST00000618217 PDE4DQ08499 809 aa25.87■■□□□ 1.73
CBWD3-213ENST00000618217 TBCKQ8TEA7 893 aa25.87■■□□□ 1.73
CBWD3-213ENST00000618217 MPHOSPH6Q99547 160 aaKnown RBP25.87■■□□□ 1.73
CBWD3-213ENST00000618217 CENPFP49454 3210 aa25.86■■□□□ 1.73
CBWD3-213ENST00000618217 EIF3JO75822 258 aaKnown RBP25.86■■□□□ 1.73
CBWD3-213ENST00000618217 CCND2P30279 289 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms