RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 CATIPQ7Z7H3 387 aa25.99■■□□□ 1.75
ARHGEF1-223ENST00000617585 SKAP1Q86WV1 359 aa25.99■■□□□ 1.75
ARHGEF1-223ENST00000617585 VTI1AQ96AJ9 217 aa25.99■■□□□ 1.75
ARHGEF1-223ENST00000617585 TIMP1P01033 207 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 MCM5P33992 734 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 CREB3L3Q68CJ9 461 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 TMTC2Q8N394 836 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 TMEM87BQ96K49 555 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 PCDHA1Q9Y5I3 950 aa25.98■■□□□ 1.75
ARHGEF1-223ENST00000617585 SMARCA1P28370 1054 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 CPT1AP50416 773 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 ITGA7Q13683 1181 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 PPP2R5BQ15173 497 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 SHHQ15465 462 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 CCDC62Q6P9F0 684 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 RMDN3Q96TC7 470 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 ANO2Q9NQ90 1003 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 POLR3EQ9NVU0 708 aa25.97■■□□□ 1.75
ARHGEF1-223ENST00000617585 A6NJR5 290 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 TLR3O15455 904 aaKnown RBP25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 PRC1O43663 620 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 DDAH1O94760 285 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 LIFRP42702 1097 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 C9orf50Q5SZB4 431 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 CASC1Q6TDU7 716 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 PIGSQ96S52 555 aa25.96■■□□□ 1.75
ARHGEF1-223ENST00000617585 PNMA6FA0A0J9YX94 578 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 CFBP00751 764 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 TTLL4Q14679 1199 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 STXBP2Q15833 593 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 ZNF654Q8IZM8 581 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 OR6J1Q8NGC5 347 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 PXMP2Q9NR77 195 aa25.95■■□□□ 1.74
ARHGEF1-223ENST00000617585 SH2B2O14492 632 aaPredicted RBP25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 ARIH2O95376 493 aa25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 TXNP10599 105 aaKnown RBP25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 PURAQ00577 322 aaKnown RBP25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 COL9A3Q14050 684 aaPredicted RBP25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 MFSD5Q6N075 450 aa25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 SPZ1Q9BXG8 430 aa25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 GPHNQ9NQX3 736 aaPredicted RBP25.94■■□□□ 1.74
ARHGEF1-223ENST00000617585 KPNA6O60684 536 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 EIF3JO75822 258 aaKnown RBP25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 EPHB4P54760 987 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 FPGSQ05932 587 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 TSGA10IPQ3SY00 556 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 BRDTQ58F21 947 aaPredicted RBP25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 ARHGEF16Q5VV41 709 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 FAM109BQ6ICB4 259 aaPredicted RBP25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 HOMER1Q86YM7 354 aa25.93■■□□□ 1.74
ARHGEF1-223ENST00000617585 NR3C2P08235 984 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 KIF5BP33176 963 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 CTCFLQ8NI51 663 aaPredicted RBP25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 COPS5Q92905 334 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 LZTS2Q9BRK4 669 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 PDCD2LQ9BRP1 358 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 MYH7BA7E2Y1 1941 aa25.92■■□□□ 1.74
ARHGEF1-223ENST00000617585 CDC45O75419 566 aa25.91■■□□□ 1.74
ARHGEF1-223ENST00000617585 RNF20Q5VTR2 975 aa25.91■■□□□ 1.74
ARHGEF1-223ENST00000617585 MTG1Q9BT17 334 aaPredicted RBP25.91■■□□□ 1.74
ARHGEF1-223ENST00000617585 CALM1P0DP23 149 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 CALM2P0DP24 149 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 CALM3P0DP25 149 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 EIF2AK2P19525 551 aaKnown RBP25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 GNAQP50148 359 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 PSMC6P62333 389 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 SGMS1Q86VZ5 419 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 CCDC136Q96JN2 1154 aa25.9■■□□□ 1.74
ARHGEF1-223ENST00000617585 GCOM1H8Y6P7 765 aaPredicted RBP25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 B4GALT4O60513 344 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 POLR2MP0CAP2 368 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 ARHGAP1Q07960 439 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 VSIG10LQ86VR7 867 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 DEFB123Q8N688 67 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 EMID1Q96A84 441 aaPredicted RBP25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 MYL10Q9BUA6 226 aa25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 ALDH8A1Q9H2A2 487 aaPredicted RBP25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 DDX41Q9UJV9 622 aaKnown RBP25.89■■□□□ 1.74
ARHGEF1-223ENST00000617585 CCDC69A6NI79 296 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 GH1P01241 217 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 SMAD3P84022 425 aaKnown RBP25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 PPIGQ13427 754 aaKnown RBP eCLIP25.88■■□□□ 1.732e-9■■■□□ 19.2
ARHGEF1-223ENST00000617585 LY6KQ17RY6 165 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 SEPT14Q6ZU15 432 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 TMEM199Q8N511 208 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 MTMR10Q9NXD2 777 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 FRMPD4Q14CM0 1322 aa25.88■■□□□ 1.73
ARHGEF1-223ENST00000617585 RGS20O76081 388 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 MYL3P08590 195 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 HOXA13P31271 388 aaPredicted RBP25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 PGM5Q15124 567 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 NFRKBQ6P4R8 1299 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 C16orf59Q7L2K0 433 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 TRPV6Q9H1D0 765 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 COL6A3P12111 3177 aa25.87■■□□□ 1.73
ARHGEF1-223ENST00000617585 EXOSC10Q01780 885 aaKnown RBP25.86■■□□□ 1.73
ARHGEF1-223ENST00000617585 PTPN11Q06124 597 aaPredicted RBP25.86■■□□□ 1.73
ARHGEF1-223ENST00000617585 KCNV1Q6PIU1 500 aa25.86■■□□□ 1.73
ARHGEF1-223ENST00000617585 NFXL1Q6ZNB6 911 aa25.86■■□□□ 1.73
ARHGEF1-223ENST00000617585 Q7L0L9 218 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms