RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 OR52Z1P0C646 297 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 GNA11P29992 359 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 GALNT17Q6IS24 598 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 KRT25Q7Z3Z0 450 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 SIAH1Q8IUQ4 282 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 MYH8P13535 1937 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 PLCG1P19174 1290 aa12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 UBA7P41226 1012 aa12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.36
PCDHGA9-202ENST00000616887 POTEMA6NI47 508 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 TXLNAP40222 546 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 TXKP42681 527 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 ADCY7P51828 1080 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 COL4A5P29400 1685 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
PCDHGA9-202ENST00000616887 DPEP1P16444 411 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 CORO7P57737 925 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 TUBB4AP04350 444 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PRCPP42785 496 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 TGFB2P61812 414 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 CABP7Q86V35 215 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 EHD4Q9H223 541 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PDE11AQ9HCR9 933 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 DONSONQ9NYP3 566 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SLC1A4P43007 532 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 ICA1Q05084 483 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 MCM6Q14566 821 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 LONRF2Q1L5Z9 754 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 NUDT12Q9BQG2 462 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SERPINA10Q9UK55 444 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 SUFUQ9UMX1 484 aa12.76□□□□□ -0.37
PCDHGA9-202ENST00000616887 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 KLRC4O43908 158 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 GH2P01242 217 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 GSCP56915 257 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 DNAJC21Q5F1R6 531 aaKnown RBP12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 CDKAL1Q5VV42 579 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 VPS33BQ9H267 617 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 ESYT2A0FGR8 921 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 ZBTB5O15062 677 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 NRDCO43847 1150 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 KCNA3P22001 575 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 NELFBQ8WX92 580 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 CSRNP1Q96S65 589 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 P2RX7Q99572 595 aaKnown RBP12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
PCDHGA9-202ENST00000616887 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms