RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 INHBAP08476 426 aa13.71□□□□□ -0.22
TCF4-248ENST00000616053 DAB2P98082 770 aa13.71□□□□□ -0.22
TCF4-248ENST00000616053 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.22
TCF4-248ENST00000616053 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.22
TCF4-248ENST00000616053 CFAP61Q8NHU2 1237 aa13.71□□□□□ -0.22
TCF4-248ENST00000616053 ZSCAN18Q8TBC5 510 aaPredicted RBP13.71□□□□□ -0.22
TCF4-248ENST00000616053 RALGDSQ12967 914 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 QTRT2Q9H974 415 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 IMPDH2P12268 514 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 SLC9A1P19634 815 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 SPATA5Q8NB90 893 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 CASS4Q9NQ75 786 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 ARMT1Q9H993 441 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 RBM8AQ9Y5S9 174 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 CPP00450 1065 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 KRT8P05787 483 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 HSPA1AP0DMV8 641 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 HSPA1BP0DMV9 641 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 LMNB2Q03252 620 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 ARHGEF18Q6ZSZ5 1173 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 CCHCR1Q8TD31 782 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 SGK1O00141 431 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 MYO1DO94832 1006 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 MCM4P33991 863 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 KRT77Q7Z794 578 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 EFHD1Q9BUP0 239 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 RPF1Q9H9Y2 349 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 TRPC7Q9HCX4 862 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 E5RI56 91 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 WBP4O75554 376 aaKnown RBP13.7□□□□□ -0.22
TCF4-248ENST00000616053 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 ATG16L1Q676U5 607 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 FANCIQ9NVI1 1328 aa13.7□□□□□ -0.22
TCF4-248ENST00000616053 TTI1O43156 1089 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 ANGPT1Q15389 498 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 NAF1Q96HR8 494 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 KIF17Q9P2E2 1029 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 ZNF148Q9UQR1 794 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 SFMBT2Q5VUG0 894 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 NT5C3AQ9H0P0 336 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 AMFRQ9UKV5 643 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 AKR1B15C9JRZ8 316 aaPredicted RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 EIF3DO15371 548 aaKnown RBP eCLIP13.69□□□□□ -0.22
TCF4-248ENST00000616053 STAT1P42224 750 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 RPS6KA1Q15418 735 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 LMNAP02545 664 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 PAMP19021 973 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 KIF19Q2TAC6 998 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 FBXL21Q9UKT6 434 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 A0A1B0GUA9 196 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 LRRC53A6NM62 1247 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 EEF1DP29692 281 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 LRRC31Q6UY01 552 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 REXO1Q8N1G1 1221 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 PLCH2O75038 1416 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 HNRNPDLO14979 420 aaKnown RBP13.69□□□□□ -0.22
TCF4-248ENST00000616053 E2F6O75461 281 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 ANKS6Q68DC2 871 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 NRBF2Q96F24 287 aa13.69□□□□□ -0.22
TCF4-248ENST00000616053 ITGA6P23229 1130 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 AKAP7Q9P0M2 348 aaPredicted RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 SPDYE5A6NIY4 337 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 SPDYE7PQ495Y7 208 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 ARHGAP18Q8N392 663 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 EVCP57679 992 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 NLRP9Q7RTR0 991 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 TRIM54Q9BYV2 358 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 SUN2Q9UH99 717 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 TSR3Q9UJK0 312 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 THAP12O43422 761 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms