RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 NUP62P37198 522 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 GJA8P48165 433 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 SNAP25P60880 206 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 AP2B1P63010 937 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PLIN5Q00G26 463 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PHF23Q9BUL5 403 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PDE5AO76074 875 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 KCNA2P16389 499 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CCT6AP40227 531 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CYTH1Q15438 398 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 FRMPD1Q5SYB0 1578 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 NCAPH2Q6IBW4 605 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 UNC45AQ9H3U1 944 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 RPAP3Q9H6T3 665 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 INTUQ9ULD6 942 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 ABCC3O15438 1527 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PHACTR3Q96KR7 559 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 ARL2BPQ9Y2Y0 163 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 TMEM2Q9UHN6 1383 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PSMC6P62333 389 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 MYL5Q02045 173 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 LDHAL6AQ6ZMR3 332 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 SUCLA2Q9P2R7 463 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PDE9AO76083 593 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 MAP3K19Q56UN5 1328 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 LEO1Q8WVC0 666 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 WTAPQ15007 396 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC149Q6ZUS6 474 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 ARL10Q8N8L6 244 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MTA3Q9BTC8 594 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 ELF1P32519 619 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 TBC1D1Q86TI0 1168 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MAML3Q96JK9 1138 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 LMBRD1Q9NUN5 540 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 TTI1O43156 1089 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 GSNP06396 782 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MAP4P27816 1152 aaKnown RBP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 GUCY2FP51841 1108 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 ARHGDIAP52565 204 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 VCAM1P19320 739 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 DCTN2Q13561 401 aaKnown RBP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 KIF9Q9HAQ2 790 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 ARHGEF3Q9NR81 526 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MAPK13O15264 365 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 NUGGCQ68CJ6 796 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 C11orf88Q6PI97 169 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MYO1CO00159 1063 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 TMTC4Q5T4D3 741 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 TERB1Q8NA31 727 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 SOX13Q9UN79 622 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 KDRP35968 1356 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 AXIN1O15169 862 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 GDPD2Q9HCC8 539 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 MSR1P21757 451 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 SMTNP53814 917 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 HAND2P61296 217 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL12A1-211ENST00000615798 GIPC2Q8TF65 315 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 QRICH2Q9H0J4 1663 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 RFX7Q2KHR2 1363 aa10.05□□□□□ -0.8
COL12A1-211ENST00000615798 POTECB2RU33 542 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 RASSF9O75901 435 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 KRT77Q7Z794 578 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 WDR60Q8WVS4 1066 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 B3GALT6Q96L58 329 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ETAA1Q9NY74 926 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 NINQ8N4C6 2090 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 SMAPO00193 183 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 KRT76Q01546 638 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ZNF483Q8TF39 744 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 MCRS1Q96EZ8 462 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 Q6ZUG5 572 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms