RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EPHB1P54762 984 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ASIC1P78348 528 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 A2MP01023 1474 aa11.76□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KIF11P52732 1056 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SYTL3Q4VX76 610 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RAB44Q7Z6P3 723 aaPredicted RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ANP32DO95626 131 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 IGBP1P78318 339 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ANKRD20A3Q5VUR7 823 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NCAPG2Q86XI2 1143 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MAP7D3Q8IWC1 876 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 VAV3Q9UKW4 847 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 UBE4BO95155 1302 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 H0Y626 953 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 C10orf53Q8N6V4 93 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TRIM4Q9C037 500 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MAGEA9P43362 315 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PDE4BQ07343 736 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 STX1AQ16623 288 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 STX19Q8N4C7 294 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DIABLOQ9NR28 239 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TIMM8BQ9Y5J9 83 aaPredicted RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EBAG9O00559 213 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 AP1G2O75843 785 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EIF2B5Q13144 721 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SUZ12Q15022 739 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TADA2BQ86TJ2 420 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CCDC13Q8IYE1 715 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CCDC105Q8IYK2 499 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ADAM21Q9UKJ8 722 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SCINQ9Y6U3 715 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CFAP69A5D8W1 941 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TNFAIP2Q03169 654 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EXO5Q9H790 373 aa11.75□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GSPT1P15170 499 aaKnown RBP11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 STX17P56962 302 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ACCSLQ4AC99 568 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CD109Q6YHK3 1445 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 FRA10AC1Q70Z53 315 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GUCA1BQ9UMX6 200 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 HYOU1Q9Y4L1 999 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ADCY1Q08828 1119 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 THTPAQ9BU02 230 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TRPC1P48995 793 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SHROOM1Q2M3G4 852 aaPredicted RBP11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ULK3Q6PHR2 472 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NUP160Q12769 1436 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PSMC6P62333 389 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 POLA2Q14181 598 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KIF19Q2TAC6 998 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZSCAN18Q8TBC5 510 aaPredicted RBP11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LMBR1Q8WVP7 490 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DNAI1Q9UI46 699 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DDI2Q5TDH0 399 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZKSCAN3Q9BRR0 538 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PJA2O43164 708 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 E2F6O75461 281 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PDE9AO76083 593 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NAPAP54920 295 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CUL4AQ13619 759 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MSH6P52701 1360 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GOLGA8MH3BSY2 632 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SCG2P13521 617 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RFX3P48380 749 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MXD4Q14582 209 aaPredicted RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KLHL31Q9H511 634 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TRIM36Q9NQ86 728 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TTC19Q6DKK2 380 aaPredicted RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 BBS2Q9BXC9 721 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KIF14Q15058 1648 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 BLMP54132 1417 aaPredicted RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms