RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 RAD50Q92878 1312 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 CACNA1HO95180 2353 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 MICAL3Q7RTP6 2002 aa12.27□□□□□ -0.44
SSX3-204ENST00000612497 TMEM221A6NGB7 291 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 M0R296 226 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 NBNO60934 754 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 PARNO95453 639 aaKnown RBP12.27□□□□□ -0.45
SSX3-204ENST00000612497 STAT2P52630 851 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 CLUL1Q15846 466 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 TCTN1Q2MV58 587 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 EPC2Q52LR7 807 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 ERC1Q8IUD2 1116 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 RPAP2Q8IXW5 612 aaPredicted RBP12.27□□□□□ -0.45
SSX3-204ENST00000612497 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 MORC4Q8TE76 937 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 CHURC1Q8WUH1 139 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 IL1RAPL2Q9NP60 686 aa12.27□□□□□ -0.45
SSX3-204ENST00000612497 NLRC5Q86WI3 1866 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 KMT2EQ8IZD2 1858 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 CXCL10P02778 98 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 SNAP25P60880 206 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 GPM6BQ13491 265 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 SMAD2Q15796 467 aaKnown RBP12.26□□□□□ -0.45
SSX3-204ENST00000612497 TRIM67Q6ZTA4 783 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 FAM160B2Q86V87 743 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 ATOH1Q92858 354 aaPredicted RBP12.26□□□□□ -0.45
SSX3-204ENST00000612497 MKL1Q969V6 931 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.26□□□□□ -0.454e-6■■■□□ 18.8
SSX3-204ENST00000612497 BCL11AQ9H165 835 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
SSX3-204ENST00000612497 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
SSX3-204ENST00000612497 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
SSX3-204ENST00000612497 EXOC6BQ9Y2D4 811 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 MYH7P12883 1935 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 ZBED9Q6R2W3 1325 aa12.26□□□□□ -0.45
SSX3-204ENST00000612497 RIF1Q5UIP0 2472 aaKnown RBP12.25□□□□□ -0.45
SSX3-204ENST00000612497 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 RBM47A0AV96 593 aaKnown RBP12.25□□□□□ -0.45
SSX3-204ENST00000612497 A6NJR5 290 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 MINDY4BA8MYZ0 360 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 H3BNC9 293 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 TTLL1O95922 423 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 CKBP12277 381 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 LTBRP36941 435 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
SSX3-204ENST00000612497 COL19A1Q14993 1142 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 GDF6Q6KF10 455 aaPredicted RBP12.25□□□□□ -0.45
SSX3-204ENST00000612497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
SSX3-204ENST00000612497 RPAINQ86UA6 219 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
SSX3-204ENST00000612497 STAG1Q8WVM7 1258 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 COPS5Q92905 334 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 SAMD11Q96NU1 681 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 PAG1Q9NWQ8 432 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 MTMR4Q9NYA4 1195 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
SSX3-204ENST00000612497 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 RBAK-RBAKDNI3L0D1 243 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 STXBP3O00186 592 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
SSX3-204ENST00000612497 MBTPS2O43462 519 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 NCK2O43639 380 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 AMHP03971 560 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 CHGBP05060 677 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 SLC1A4P43007 532 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 BAATQ14032 418 aaPredicted RBP12.24□□□□□ -0.45
SSX3-204ENST00000612497 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 FBXL6Q8N531 539 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 DHX38Q92620 1227 aaKnown RBP12.24□□□□□ -0.45
SSX3-204ENST00000612497 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 CCPG1Q9ULG6 757 aa12.24□□□□□ -0.45
SSX3-204ENST00000612497 PRDM1O75626 825 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 MCCP23508 829 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 HTRA4P83105 476 aaPredicted RBP12.23□□□□□ -0.45
SSX3-204ENST00000612497 DLX2Q07687 328 aaPredicted RBP12.23□□□□□ -0.45
SSX3-204ENST00000612497 PDE4DQ08499 809 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 TMEM192Q8IY95 271 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
SSX3-204ENST00000612497 SCFD2Q8WU76 684 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 ATG2AQ2TAZ0 1938 aa12.23□□□□□ -0.45
SSX3-204ENST00000612497 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 PTPDC1A2A3K4 754 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 LGR5O75473 907 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 IFIT2P09913 472 aaKnown RBP12.22□□□□□ -0.45
SSX3-204ENST00000612497 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
SSX3-204ENST00000612497 ZXDAP98168 799 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 PDE4BQ07343 736 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 RBL2Q08999 1139 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 SMAD4Q13485 552 aaKnown RBP12.22□□□□□ -0.45
SSX3-204ENST00000612497 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms