RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 STAT3P40763 770 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 JAG1P78504 1218 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 MIIPQ5JXC2 388 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 LUC7L2Q9Y383 392 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 EPN1Q9Y6I3 576 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 PNMA6FA0A0J9YX94 578 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 RCCD1A6NED2 376 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 SASH3O75995 380 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 NDUFA10O95299 355 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 EEF2P13639 858 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 FECHP22830 423 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 CYP27A1Q02318 531 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 SV2BQ7L1I2 683 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 LARP4BQ92615 738 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 PARD6BQ9BYG5 372 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 DUSP10Q9Y6W6 482 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 PNMA6AP0CW24 399 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 TRIM21P19474 475 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 HERVK_113P62684 666 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 SEPT2Q15019 361 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 NCAPH2Q6IBW4 605 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 RSRC2Q7L4I2 434 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 NOC4LQ9BVI4 516 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 DDX25Q9UHL0 483 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 SCN9AQ15858 1988 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 NPR1P16066 1061 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 EEF1GP26641 437 aaKnown RBP15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 QRICH1Q2TAL8 776 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 KRT222Q8N1A0 295 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 OR8K1Q8NGG5 319 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 DDX12PQ92771 950 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 E9PMD0 336 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 MARCH6O60337 910 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 APBA3O96018 575 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 USH1GQ495M9 461 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 DHTKD1Q96HY7 919 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 PSTPIP2Q9H939 334 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 RIC8AQ9NPQ8 531 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 SMCHD1A6NHR9 2005 aa15.73■□□□□ 0.11
PCDHGA3-202ENST00000612467 SRGAP2O75044 1071 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 PLA2G4AP47712 749 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 DMTNQ08495 405 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 FAM207AQ9NSI2 230 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 ZBTB5O15062 677 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 RHOXF2BP0C7M4 288 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 NT5C2P49902 561 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 APBA1Q02410 837 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 TMCO3Q6UWJ1 677 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 RAD54LQ92698 747 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 RHOXF2Q9BQY4 288 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 LACRTQ9GZZ8 138 aa15.72■□□□□ 0.11
PCDHGA3-202ENST00000612467 ZRANB2O95218 330 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CLK2P49760 499 aaKnown RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 SPICE1Q8N0Z3 855 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CUL5Q93034 780 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 TTYH3Q9C0H2 523 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 TDRD3Q9H7E2 651 aaKnown RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 SUGCTQ9HAC7 445 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 FAM53CQ9NYF3 392 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CAPN11Q9UMQ6 739 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CTAGE9A4FU28 777 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 POTECB2RU33 542 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 SLC1A4P43007 532 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 TMEM266Q2M3C6 531 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 SMCR8Q8TEV9 937 aaPredicted RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 PNKPQ96T60 521 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 DNAJC7Q99615 494 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CUEDC2Q9H467 287 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 CDC23Q9UJX2 597 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 PCDHA1Q9Y5I3 950 aa15.71■□□□□ 0.11
PCDHGA3-202ENST00000612467 MYL1P05976 194 aa15.7■□□□□ 0.1
PCDHGA3-202ENST00000612467 DNM2P50570 870 aa15.7■□□□□ 0.1
PCDHGA3-202ENST00000612467 AOC3Q16853 763 aa15.7■□□□□ 0.1
PCDHGA3-202ENST00000612467 KRT79Q5XKE5 535 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms