RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PPP1R13LQ8WUF5 828 aa8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CTAGE1Q96RT6 745 aa8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SH2D4AQ9H788 454 aa8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 INSL6Q9Y581 213 aa8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 EP300Q09472 2414 aaPredicted RBP8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
PTCHD3P1-201ENST00000612350 NAV1Q8NEY1 1877 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 NBNO60934 754 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 KDM4AO75164 1064 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 TBX10O75333 385 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 EYA4O95677 639 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PDGFBP01127 241 aaPredicted RBP8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 EEF2P13639 858 aaKnown RBP8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 HYAL1Q12794 435 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 FAM83BQ5T0W9 1011 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 NFRKBQ6P4R8 1299 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 HS6ST3Q8IZP7 471 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ANKRD35Q8N283 1001 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SAMD11Q96NU1 681 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CRBNQ96SW2 442 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CD207Q9UJ71 328 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DDX49Q9Y6V7 483 aaKnown RBP8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CHD8Q9HCK8 2581 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MICAL3Q7RTP6 2002 aa8.68□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ASB14A6NK59 587 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 GTF2F1P35269 517 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ZAP70P43403 619 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PTPN11Q06124 597 aaPredicted RBP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 COL9A2Q14055 689 aaPredicted RBP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PUM1Q14671 1186 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 FAM47CQ5HY64 1035 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CPXCR1Q8N123 301 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CHST13Q8NET6 341 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 AFAP1L1Q8TED9 768 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MSLNLQ96KJ4 702 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RIPOR3Q96MK2 946 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RIOK1Q9BRS2 568 aaKnown RBP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RAVER2Q9HCJ3 691 aaKnown RBP8.67□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MYH8P13535 1937 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 NLRC5Q86WI3 1866 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MYO15AQ9UKN7 3530 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 LINC01565O15544 149 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 EFCAB14O75071 495 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PPP1R37O75864 691 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MYL3P08590 195 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CYP2D6P10635 497 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SELPP16109 830 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ADAM15Q13444 863 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 LRRC8DQ7L1W4 858 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 TMEM192Q8IY95 271 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 TMEM105Q8N8V8 129 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CAGE1Q8TC20 777 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RNF166Q96A37 237 aaPredicted RBP8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ZNF512BQ96KM6 892 aaPredicted RBP8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DLL3Q9NYJ7 618 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 FBXO40Q9UH90 709 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ATRXP46100 2492 aa8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MAP1BP46821 2468 aaKnown RBP8.66□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PARNO95453 639 aaKnown RBP8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 ICAM3P32942 547 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RRP1P56182 461 aaKnown RBP8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 RBL2Q08999 1139 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 IKBKEQ14164 716 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 TTC39AQ5SRH9 613 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 EEPD1Q7L9B9 569 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 FBXO11Q86XK2 927 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 FBXO16Q8IX29 292 aaPredicted RBP8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PRPF38AQ8NAV1 312 aaKnown RBP8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SLC38A10Q9HBR0 1119 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 SWAP70Q9UH65 585 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 PCDHGA4Q9Y5G9 962 aa8.65□□□□□ -1.02
PTCHD3P1-201ENST00000612350 CEP250Q9BV73 2442 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 USP17L12C9JPN9 530 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 USP17L21D6R901 530 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GRM6O15303 877 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SRGAP3O43295 1099 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ZBED4O75132 1171 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 IDH1O75874 414 aaKnown RBP8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NUDT7P0C024 238 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 COASYQ13057 564 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MTX1Q13505 466 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms