RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 XRCC5P13010 732 aaKnown RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 SF3B2Q13435 895 aaKnown RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 PRPF4BQ13523 1007 aaKnown RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
SNX13-213ENST00000611725 ARHGEF10LQ9HCE6 1279 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 PI4KBQ9UBF8 816 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 NR2F2P24468 414 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 ABCB5Q2M3G0 1257 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 MSL1Q68DK7 614 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 CRAMP1Q96RY5 1269 aa7.06□□□□□ -1.28
SNX13-213ENST00000611725 LRRC10BA6NIK2 292 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 PPIP5K2O43314 1243 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 GDF11O95390 407 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 GNA14O95837 355 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 DLGAP5Q15398 846 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 ZYXQ15942 572 aaKnown RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 KRT27Q7Z3Y8 459 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 INTS13Q9NVM9 706 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 TMEM260Q9NX78 707 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 FLOT1O75955 427 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 FCER1AP12319 257 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 NPR1P16066 1061 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 TNNC1P63316 161 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 MAP3K9P80192 1104 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 MDM2Q00987 491 aaPredicted RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 QRICH1Q2TAL8 776 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
SNX13-213ENST00000611725 DAGLBQ8NCG7 672 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 LMBR1Q8WVP7 490 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 GJA10Q969M2 543 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 KBTBD4Q9NVX7 518 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 COL4A3BPQ9Y5P4 624 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 USP17L10C9JJH3 530 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 STXBP3O00186 592 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 POLR2FP61218 127 aaKnown RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 C16orf86Q6ZW13 317 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 SP8Q8IXZ3 490 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 CHURC1Q8WUH1 139 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 HYOU1Q9Y4L1 999 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 ANO9A1A5B4 782 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 H0YHG0 523 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 FGRP09769 529 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 EPB41P11171 864 aaKnown RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 ZNF543Q08ER8 600 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 PDIA5Q14554 519 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 POTEDQ86YR6 584 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 SPATA20Q8TB22 786 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 JDP2Q8WYK2 163 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 CSRNP1Q96S65 589 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 METTL14Q9HCE5 456 aaKnown RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 IL17RBQ9NRM6 502 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 EMILIN3Q9NT22 766 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 H2AFXP16104 143 aaPredicted RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 EIF4A3P38919 411 aaKnown RBP7.05□□□□□ -1.28
SNX13-213ENST00000611725 RASGRP2Q7LDG7 609 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 PANK4Q9NVE7 773 aa7.05□□□□□ -1.28
SNX13-213ENST00000611725 AFF2P51816 1311 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 FMN2Q9NZ56 1722 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 E9PMD0 336 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 EXOC3O60645 756 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PSMD2Q13200 908 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PPP1R18Q6NYC8 613 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 ITIH6Q6UXX5 1313 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CYTH3O43739 400 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 BMP3P12645 472 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 SMARCA1P28370 1054 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 SEPT2Q15019 361 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CFAP58Q5T655 872 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CHP1Q99653 195 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 BHMT2Q9H2M3 363 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 LARSQ9P2J5 1176 aaKnown RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 TSKSQ9UJT2 592 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 FAM184BQ9ULE4 1060 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 GAS7O60861 476 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CFAP221Q4G0U5 840 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 KRT26Q7Z3Y9 468 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 ANKS1AQ92625 1134 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 RTFDC1Q9BY42 306 aaPredicted RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 NHEJ1Q9H9Q4 299 aaPredicted RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 GOLGA6L10A0A0M3HER8 536 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 ARHGEF35A5YM69 484 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 H2AFZP0C0S5 128 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 HOXA7P31268 230 aaPredicted RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 EVX2Q03828 476 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PLS1Q14651 629 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 E2F4Q16254 413 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 ODF2Q5BJF6 829 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms