RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
LIG4-204ENST00000611712 FAM204AQ9H8W3 233 aa9.6□□□□□ -0.87
LIG4-204ENST00000611712 ITIH6Q6UXX5 1313 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 HNRNPH2P55795 449 aaKnown RBP9.59□□□□□ -0.87
LIG4-204ENST00000611712 ANKRD40Q6AI12 368 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 DDX12PQ92771 950 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 RIC8AQ9NPQ8 531 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 PKD2L1Q9P0L9 805 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 TRIM10Q9UDY6 481 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 JRKLQ9Y4A0 524 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 A0A1W2PQC6 194 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 XRCC5P13010 732 aaKnown RBP9.59□□□□□ -0.87
LIG4-204ENST00000611712 RDXP35241 583 aaKnown RBP9.59□□□□□ -0.87
LIG4-204ENST00000611712 CYP4A11Q02928 519 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 SLFN13Q68D06 897 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 MICALCLQ6ZW33 695 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 INTS13Q9NVM9 706 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 PCDHA13Q9Y5I0 950 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 CFBP00751 764 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 STK4Q13043 487 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 PAK2Q13177 524 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 PABPC4Q13310 644 aaKnown RBP eCLIP9.59□□□□□ -0.87
LIG4-204ENST00000611712 UNC13DQ70J99 1090 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 MYCT1Q8N699 235 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 CAPN11Q9UMQ6 739 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 COL4A3BPQ9Y5P4 624 aa9.59□□□□□ -0.87
LIG4-204ENST00000611712 hCG_1984214I3L0E3 225 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 FLOT1O75955 427 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 VSNL1P62760 191 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 MRPS25P82663 173 aaKnown RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 PPARDQ03181 441 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 EHHADHQ08426 723 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 TBX2Q13207 712 aaPredicted RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 CERKLQ49MI3 558 aaPredicted RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 ZNF713Q8N859 430 aaPredicted RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 NKX2-3Q8TAU0 364 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 GOLGA5Q8TBA6 731 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 VEZTQ9HBM0 779 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 KCND1Q9NSA2 647 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 AGPAT5Q9NUQ2 364 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 ZBTB21Q9ULJ3 1066 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 FRMD4BQ9Y2L6 1034 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 TMEM110-MUSTN1A8MSY1 372 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 RNF40O75150 1001 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 TDP2O95551 362 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 GUCY2FP51841 1108 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 ZYXQ15942 572 aaKnown RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 RBM26Q5T8P6 1007 aaKnown RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 CDKAL1Q5VV42 579 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 KIF13AQ9H1H9 1805 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 RHOBTB3O94955 611 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 ATP1A1P05023 1023 aaKnown RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 NR2F2P24468 414 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 PRPHP41219 470 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 KRT26Q7Z3Y9 468 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 TPH2Q8IWU9 490 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 MICALL1Q8N3F8 863 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 FNBP4Q8N3X1 1017 aaPredicted RBP9.58□□□□□ -0.88
LIG4-204ENST00000611712 OGFOD1Q8N543 542 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 FHOD1Q9Y613 1164 aa9.58□□□□□ -0.88
LIG4-204ENST00000611712 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 STXBP3O00186 592 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 KCNK3O14649 394 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 GCFC2P16383 781 aaKnown RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 RASA1P20936 1047 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 HPDP32754 393 aaPredicted RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 ACTN2P35609 894 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 ERVK-24P63145 666 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 ICA1Q05084 483 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 NFIXQ14938 502 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 MAEAQ7L5Y9 396 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 KDM3BQ7LBC6 1761 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 NDUFAB1O14561 156 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 PLA2G4AP47712 749 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 PDXDC2PQ6P474 469 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 PEX26Q7Z412 305 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 SLFN12Q8IYM2 578 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 CTNNBL1Q8WYA6 563 aaPredicted RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
LIG4-204ENST00000611712 RGPD2P0DJD1 1756 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 MRC1P22897 1456 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 PVALEFA0A1B0GWK0 134 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 MEIS1O00470 390 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 TNFAIP3P21580 790 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 GPSM2P81274 684 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 SLC7A5Q01650 507 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 PSMD2Q13200 908 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 FBXO11Q86XK2 927 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 GIMAP8Q8ND71 665 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms