RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 DNM2P50570 870 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 ICA1Q05084 483 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 MCM6Q14566 821 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 SEPT2Q15019 361 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 CYP26C1Q6V0L0 522 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 GMCL1P1Q8NEA9 526 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 SIPA1L1O43166 1804 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 MYMKA6NI61 221 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 MARCH6O60337 910 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 USP11P51784 963 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
SRRT-213ENST00000611405 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 PCDHA1Q9Y5I3 950 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 RAD21O60216 631 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 FCER1AP12319 257 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 KRT9P35527 623 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 ZNF397Q8NF99 534 aaPredicted RBP13.33□□□□□ -0.28
SRRT-213ENST00000611405 HAS1Q92839 578 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
SRRT-213ENST00000611405 MRPL44Q9H9J2 332 aaKnown RBP13.33□□□□□ -0.28
SRRT-213ENST00000611405 COL2A1P02458 1487 aaPredicted RBP13.32□□□□□ -0.28
SRRT-213ENST00000611405 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 POTEMA6NI47 508 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 FANCGO15287 622 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 WDR24Q96S15 920 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■■■□□ 15.7
SRRT-213ENST00000611405 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
SRRT-213ENST00000611405 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
SRRT-213ENST00000611405 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 F5H6K3 240 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 KLRC3Q07444 240 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 PSMD2Q13200 908 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 ELF2Q15723 593 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 KIAA0895Q8NCT3 520 aa13.32□□□□□ -0.28
SRRT-213ENST00000611405 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
SRRT-213ENST00000611405 ZNF646O15015 1829 aaPredicted RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 CYP3A7-CYP3A51PA0A087WV96 503 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 CYP3A7P24462 503 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 SHROOM1Q2M3G4 852 aaPredicted RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 HYIQ5T013 277 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 CENPPQ6IPU0 288 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 MOXD1Q6UVY6 613 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 FEZ1Q99689 392 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 NUP58Q9BVL2 599 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 CAPN11Q9UMQ6 739 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 KIF5CO60282 957 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 ERVK-24P63145 666 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 GUF1Q8N442 669 aaKnown RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 CNOT6LQ96LI5 555 aaKnown RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 MBOAT7Q96N66 472 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 NT5C3AQ9H0P0 336 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 STK32BQ9NY57 414 aa13.31□□□□□ -0.28
SRRT-213ENST00000611405 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
SRRT-213ENST00000611405 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 PES1O00541 588 aaKnown RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 PPIP5K2O43314 1243 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 GDF11O95390 407 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 FGFR1OPO95684 399 aaKnown RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 NDUFB10O96000 172 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 B4DLN1 442 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 SYDE2Q5VT97 1194 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 PRMT6Q96LA8 375 aaPredicted RBP13.3□□□□□ -0.28
SRRT-213ENST00000611405 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
SRRT-213ENST00000611405 TTC26A0AVF1 554 aa13.29□□□□□ -0.28
SRRT-213ENST00000611405 FOXR2Q6PJQ5 311 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms