RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
NEK3-205ENST00000610828 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
NEK3-205ENST00000610828 PDCL3Q9H2J4 239 aa15.26■□□□□ 0.03
NEK3-205ENST00000610828 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
NEK3-205ENST00000610828 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
NEK3-205ENST00000610828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
NEK3-205ENST00000610828 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 PES1O00541 588 aaKnown RBP15.25■□□□□ 0.03
NEK3-205ENST00000610828 BMP3P12645 472 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 DLGAP5Q15398 846 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 TTI2Q6NXR4 508 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 CNNM4Q6P4Q7 775 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 DYMQ7RTS9 669 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 SPICE1Q8N0Z3 855 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 CSGALNACT2Q8N6G5 542 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 EEF2KMTQ96G04 330 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 DESI2Q9BSY9 194 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 ANO3Q9BYT9 981 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 MYMKA6NI61 221 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
NEK3-205ENST00000610828 MTF1Q14872 753 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 SYDE2Q5VT97 1194 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
NEK3-205ENST00000610828 P2RX5Q93086 422 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 PSMD1Q99460 953 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
NEK3-205ENST00000610828 SLC39A2Q9NP94 309 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
NEK3-205ENST00000610828 HERC5Q9UII4 1024 aaKnown RBP15.25■□□□□ 0.03
NEK3-205ENST00000610828 ARFGEF1Q9Y6D6 1849 aa15.25■□□□□ 0.03
NEK3-205ENST00000610828 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 MEIS2O14770 477 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 DPEP1P16444 411 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 EEF1GP26641 437 aaKnown RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 FBXO11Q86XK2 927 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 RAD54LQ92698 747 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 NAA15Q9BXJ9 866 aaKnown RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 COL2A1P02458 1487 aaPredicted RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 VIL1P09327 827 aaKnown RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 CCNE1P24864 410 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 NAA30Q147X3 362 aaPredicted RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 KIAA0895Q8NCT3 520 aa15.24■□□□□ 0.03
NEK3-205ENST00000610828 DUSP9Q99956 384 aaKnown RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 ZNF70Q9UC06 446 aaPredicted RBP15.24■□□□□ 0.03
NEK3-205ENST00000610828 PSME4Q14997 1843 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 GOLGA6L9A6NEM1 432 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 PPP1R2P41236 205 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 ECE1P42892 770 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 USP11P51784 963 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 ECM1Q16610 540 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 ANKRD40Q6AI12 368 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 UNC13DQ70J99 1090 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 GTPBP4Q9BZE4 634 aaKnown RBP15.23■□□□□ 0.03
NEK3-205ENST00000610828 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
NEK3-205ENST00000610828 IDEP14735 1019 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 TAL1P17542 331 aaPredicted RBP15.22■□□□□ 0.03
NEK3-205ENST00000610828 KCNA3P22001 575 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
NEK3-205ENST00000610828 TMEM119Q4V9L6 283 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
NEK3-205ENST00000610828 GMLQ99445 158 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 PHLPP2Q6ZVD8 1323 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 CCDC175P0C221 793 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 TRIM14Q14142 442 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 FAM151AQ8WW52 585 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 ANKRD7Q92527 254 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 DDX12PQ92771 950 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 COL4A5P29400 1685 aa15.22■□□□□ 0.03
NEK3-205ENST00000610828 PVALEFA0A1B0GWK0 134 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 SPDYE3A6NKU9 549 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 SLU7O95391 586 aaKnown RBP15.21■□□□□ 0.03
NEK3-205ENST00000610828 ARHGAP4P98171 946 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 SYCP1Q15431 976 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 MB21D1Q8N884 522 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 P2RX7Q99572 595 aaKnown RBP15.21■□□□□ 0.03
NEK3-205ENST00000610828 ARID3AQ99856 593 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 KCNMB3Q9NPA1 279 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 ABHD10Q9NUJ1 306 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 RNF225M0QZC1 329 aaPredicted RBP15.21■□□□□ 0.03
NEK3-205ENST00000610828 BAG6P46379 1132 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms