RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PPP6R2O75170 966 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 Q4G0T1 1027 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 CCDC38Q502W7 563 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 RINLQ6ZS11 566 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 MIPOL1Q8TD10 442 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 CHMP6Q96FZ7 201 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 MS4A14Q96JA4 679 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 PPP1R12CQ9BZL4 782 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 SMAPO00193 183 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 KCNQ3O43525 872 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 ORC4O43929 436 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 TOM1O60784 492 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 ERCC5P28715 1186 aaPredicted RBP13.83□□□□□ -0.2
CTCFL-218ENST00000608440 AFMP43652 599 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 MAGOHP61326 146 aaKnown RBP13.83□□□□□ -0.2
CTCFL-218ENST00000608440 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 MAGOHBQ96A72 148 aaKnown RBP13.83□□□□□ -0.2
CTCFL-218ENST00000608440 OPTNQ96CV9 577 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 ELAC2Q9BQ52 826 aaKnown RBP13.83□□□□□ -0.2
CTCFL-218ENST00000608440 ECT2Q9H8V3 914 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 UBAP1LF5GYI3 381 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 HGSO14964 777 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 UBOX5O94941 541 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 GSTA1P08263 222 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 MYL6BP14649 208 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 EIF4BP23588 611 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 KRT83P78385 493 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ZRSR2Q15696 482 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 BTG4Q9NY30 223 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ITIH6Q6UXX5 1313 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 IFIT3O14879 490 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 PHKG2P15735 406 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 PAFAH1B1P43034 410 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ATP11AP98196 1134 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 UBXN1Q04323 297 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 RASA3Q14644 834 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 CDKAL1Q5VV42 579 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 TRPM8Q7Z2W7 1104 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 FAM114A1Q8IWE2 563 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 KLHL29Q96CT2 875 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ZNF274Q96GC6 653 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 NKX1-2Q9UD57 310 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-218ENST00000608440 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
CTCFL-218ENST00000608440 FUT4P22083 530 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 INHBCP55103 352 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
CTCFL-218ENST00000608440 NCALDP61601 193 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTCFL-218ENST00000608440 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-218ENST00000608440 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 TRIM33Q9UPN9 1127 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 HIP1RO75146 1068 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 CTNNA1P35221 906 aaKnown RBP13.81□□□□□ -0.2
CTCFL-218ENST00000608440 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 RUBCNQ92622 972 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
CTCFL-218ENST00000608440 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 PFDN1O60925 122 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 SASH1O94885 1247 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 MBD4O95243 580 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 MOCS3O95396 460 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 VIMP08670 466 aaKnown RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 RARAP10276 462 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 DESP17661 470 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 MSH2P43246 934 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 LACTBP83111 547 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 KLC1Q07866 573 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 KIF5AQ12840 1032 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 LUC7L2Q9Y383 392 aaKnown RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 FAM237AA0A1B0GTK4 181 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 E7EWF7 191 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 HSD17B3P37058 310 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 LBRQ14739 615 aaKnown RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
CTCFL-218ENST00000608440 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms