RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 POTECB2RU33 542 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 POTEBQ6S5H4 581 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 SV2BQ7L1I2 683 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 SERPINA10Q9UK55 444 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 PLIN4Q96Q06 1357 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 ZBTB22O15209 634 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 ARHGAP6O43182 974 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 CFBP00751 764 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 TFRCP02786 760 aaKnown RBP17.8■□□□□ 0.44
CTSA-214ENST00000606788 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 FAM83BQ5T0W9 1011 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
CTSA-214ENST00000606788 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 ANO3Q9BYT9 981 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 KIAA1024Q9UPX6 916 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 PRPHP41219 470 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 STIM1Q13586 685 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 NELFCDQ8IXH7 590 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 KIAA0895Q8NCT3 520 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 FZD1Q9UP38 647 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 LAD1O00515 517 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 EGFRP00533 1210 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 ANKRD20A12PQ8NF67 263 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 PYM1Q9BRP8 204 aaKnown RBP17.8■□□□□ 0.44
CTSA-214ENST00000606788 BCAS3Q9H6U6 928 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 PKD2L1Q9P0L9 805 aa17.8■□□□□ 0.44
CTSA-214ENST00000606788 MYH4Q9Y623 1939 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 KRT9P35527 623 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 MTIF2P46199 727 aaKnown RBP17.79■□□□□ 0.44
CTSA-214ENST00000606788 PPP4R3BQ5MIZ7 849 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 DDX12PQ92771 950 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 CHP1Q99653 195 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 ESYT2A0FGR8 921 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
CTSA-214ENST00000606788 CHMP2AO43633 222 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 RRP9O43818 475 aaKnown RBP17.79■□□□□ 0.44
CTSA-214ENST00000606788 IGSF3O75054 1194 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 BMP3P12645 472 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 ERCC6LQ2NKX8 1250 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 NCAPH2Q6IBW4 605 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 PDCL2Q8N4E4 241 aa17.79■□□□□ 0.44
CTSA-214ENST00000606788 GIMAP8Q8ND71 665 aaPredicted RBP17.79■□□□□ 0.44
CTSA-214ENST00000606788 MAGEC2Q9UBF1 373 aaPredicted RBP17.79■□□□□ 0.44
CTSA-214ENST00000606788 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 POTEFA5A3E0 1075 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 GTF2F1P35269 517 aaKnown RBP eCLIP17.78■□□□□ 0.446e-6■■■■□ 21.5
CTSA-214ENST00000606788 ETF1P62495 437 aaKnown RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 POTEGQ6S5H5 508 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 DUSP9Q99956 384 aaKnown RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 EHD4Q9H223 541 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 ZNF70Q9UC06 446 aaPredicted RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 MORC2Q9Y6X9 1032 aaPredicted RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 MFAP3LO75121 409 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 FBXO11Q86XK2 927 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 AK8Q96MA6 479 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 SYDE2Q5VT97 1194 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 PRAMEF18Q5VWM3 479 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
CTSA-214ENST00000606788 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
CTSA-214ENST00000606788 FAM170AA1A519 330 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 MEIS2O14770 477 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 SMARCA1P28370 1054 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 TTI2Q6NXR4 508 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 CNOT6LQ96LI5 555 aaKnown RBP17.77■□□□□ 0.44
CTSA-214ENST00000606788 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
CTSA-214ENST00000606788 TTC26A0AVF1 554 aa17.77■□□□□ 0.43
CTSA-214ENST00000606788 ZNF76P36508 570 aa17.77■□□□□ 0.43
CTSA-214ENST00000606788 P2RX5Q93086 422 aa17.77■□□□□ 0.43
CTSA-214ENST00000606788 CCDC47Q96A33 483 aaKnown RBP17.77■□□□□ 0.43
CTSA-214ENST00000606788 SEMA6BQ9H3T3 888 aa17.77■□□□□ 0.43
CTSA-214ENST00000606788 STX10O60499 249 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 NT5C2P49902 561 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 PSMC6P62333 389 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 ERVK-24P63145 666 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 CBX1P83916 185 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 TUBGCP2Q9BSJ2 902 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 AMNQ9BXJ7 453 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 AGPAT5Q9NUQ2 364 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 TRIM10Q9UDY6 481 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 PRR12Q9ULL5 1215 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 ASTN2O75129 1339 aaPredicted RBP17.76■□□□□ 0.43
CTSA-214ENST00000606788 SPDYE3A6NKU9 549 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms