RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 GOLGA8AA7E2F4 631 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 GOLGA8BA8MQT2 603 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 GCOM1H8Y6P7 765 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 SEC24BO95487 1268 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 C6orf222P0C671 652 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 POLR2MP0CAP2 368 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 ADD1P35611 737 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 EVCP57679 992 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 KCNA10Q16322 511 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 SLC39A5Q6ZMH5 540 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 CNTNAP5Q8WYK1 1306 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 IWS1Q96ST2 819 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 MPHOSPH6Q99547 160 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 PXMP2Q9NR77 195 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 SEC63Q9UGP8 760 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
SHROOM1-207ENST00000606676 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 NID2Q14112 1375 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 B4DLN1 442 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 DYNC1LI2O43237 492 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 NR3C2P08235 984 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 EIF2AK2P19525 551 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 MRPL12P52815 198 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 ACLYP53396 1101 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 TOB2Q14106 344 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 SNX17Q15036 470 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 NOL8Q76FK4 1167 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 C7orf61Q8IZ16 206 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 PDCD2LQ9BRP1 358 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 UPF3BQ9BZI7 483 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 Q9Y3F1 56 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 MYH6P13533 1939 aa14.78□□□□□ -0.04
SHROOM1-207ENST00000606676 LAMA3Q16787 3333 aa14.77□□□□□ -0.04
SHROOM1-207ENST00000606676 MOXD2PA6NHM9 499 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 MEIS2O14770 477 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 ARIH2O95376 493 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 ASGR1P07306 291 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 METAP2P50579 478 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 BEX3Q00994 111 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 STXBP2Q15833 593 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 GNASQ5JWF2 1037 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 CCDC62Q6P9F0 684 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 USP17L6PQ6QN14 398 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 IL31RAQ8NI17 732 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 SCFD2Q8WU76 684 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 NAP1L2Q9ULW6 460 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 V9GY48 417 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-207ENST00000606676 PIK3CDO00329 1044 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 EIF3JO75822 258 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 RGS20O76081 388 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 PDIA3P30101 505 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 RTP1P59025 263 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 ANAPC15P60006 121 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 PGM5Q15124 567 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 FSCN1Q16658 493 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 C1orf53Q5VUE5 145 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 WWC2Q6AWC2 1192 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 HEATR3Q7Z4Q2 680 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 VSIG10LQ86VR7 867 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 FCHSD1Q86WN1 690 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 PCSK9Q8NBP7 692 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 GPKOWQ92917 476 aaPredicted RBP eCLIP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 IL17RAQ96F46 866 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 AP5M1Q9H0R1 490 aa14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 ZMYND8Q9ULU4 1186 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-207ENST00000606676 FRMPD4Q14CM0 1322 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 TXNP10599 105 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 NTRK3Q16288 839 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 TRIM60Q495X7 471 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 C8orf34Q49A92 452 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 TYW1BQ6NUM6 668 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 SEPT14Q6ZU15 432 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 COPS5Q92905 334 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 PSTPIP2Q9H939 334 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 PCDH10Q9P2E7 1040 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 ATP11BQ9Y2G3 1177 aa14.75□□□□□ -0.05
SHROOM1-207ENST00000606676 ELP1O95163 1332 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 NKRFO15226 690 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 MYCLP12524 364 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 SYN1P17600 705 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 MRPS9P82933 396 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 LY6KQ17RY6 165 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 CXCL17Q6UXB2 119 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 ALDH8A1Q9H2A2 487 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 PRO3102Q9H379 93 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 STARD7Q9NQZ5 370 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
SHROOM1-207ENST00000606676 STXBP3O00186 592 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 EIF5BO60841 1220 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms