RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ITGA7Q13683 1181 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 TTLL4Q14679 1199 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 SHHQ15465 462 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 BRDTQ58F21 947 aaPredicted RBP21.03■□□□□ 0.96
CCDC12-208ENST00000603885 CREB3L3Q68CJ9 461 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 SLC43A3Q8NBI5 491 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 PIGSQ96S52 555 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 LY9Q9HBG7 655 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 TIMP1P01033 207 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 TXNP10599 105 aaKnown RBP21.02■□□□□ 0.96
CCDC12-208ENST00000603885 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 STXBP2Q15833 593 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 SLC35G1Q2M3R5 365 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 C9orf50Q5SZB4 431 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 ARHGEF16Q5VV41 709 aa21.02■□□□□ 0.96
CCDC12-208ENST00000603885 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.96
CCDC12-208ENST00000603885 OPLAHO14841 1288 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 CYTH3O43739 400 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 DDAH1O94760 285 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 KIF5BP33176 963 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 HSD17B4P51659 736 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 GHRHRQ02643 423 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 ZNF654Q8IZM8 581 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 TMTC2Q8N394 836 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 SAMD3Q8N6K7 520 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 CTCFLQ8NI51 663 aaPredicted RBP21.01■□□□□ 0.95
CCDC12-208ENST00000603885 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 TMEM87BQ96K49 555 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 MAP3K14Q99558 947 aa21.01■□□□□ 0.95
CCDC12-208ENST00000603885 GPHNQ9NQX3 736 aaPredicted RBP21.01■□□□□ 0.95
CCDC12-208ENST00000603885 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
CCDC12-208ENST00000603885 PNMA6FA0A0J9YX94 578 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 CD4P01730 458 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 MYL3P08590 195 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 EIF2AK2P19525 551 aaKnown RBP21■□□□□ 0.95
CCDC12-208ENST00000603885 PSMC6P62333 389 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 RNF20Q5VTR2 975 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 MFSD5Q6N075 450 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 NFXL1Q6ZNB6 911 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 DEFB123Q8N688 67 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 COPS5Q92905 334 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 PXMP2Q9NR77 195 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 GRIN2DO15399 1336 aa21■□□□□ 0.95
CCDC12-208ENST00000603885 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
CCDC12-208ENST00000603885 SH2B2O14492 632 aaPredicted RBP20.99■□□□□ 0.95
CCDC12-208ENST00000603885 CDC45O75419 566 aa20.99■□□□□ 0.95
CCDC12-208ENST00000603885 PURAQ00577 322 aaKnown RBP20.99■□□□□ 0.95
CCDC12-208ENST00000603885 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
CCDC12-208ENST00000603885 MTG1Q9BT17 334 aaPredicted RBP20.99■□□□□ 0.95
CCDC12-208ENST00000603885 MYL10Q9BUA6 226 aa20.99■□□□□ 0.95
CCDC12-208ENST00000603885 A6NJR5 290 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 KPNA6O60684 536 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 EIF3JO75822 258 aaKnown RBP20.98■□□□□ 0.95
CCDC12-208ENST00000603885 ARIH2O95376 493 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 NR3C2P08235 984 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 EPHB4P54760 987 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 CCDC62Q6P9F0 684 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 Q7L0L9 218 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 RNPC3Q96LT9 517 aaKnown RBP20.98■□□□□ 0.95
CCDC12-208ENST00000603885 SPZ1Q9BXG8 430 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 PPP1R12CQ9BZL4 782 aa20.98■□□□□ 0.95
CCDC12-208ENST00000603885 GCOM1H8Y6P7 765 aaPredicted RBP20.97■□□□□ 0.95
CCDC12-208ENST00000603885 GH1P01241 217 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 POLR2MP0CAP2 368 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 HOXA13P31271 388 aaPredicted RBP20.97■□□□□ 0.95
CCDC12-208ENST00000603885 LIFRP42702 1097 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 GNAQP50148 359 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 PPIGQ13427 754 aaKnown RBP eCLIP20.97■□□□□ 0.954e-10■□□□□ 10.5
CCDC12-208ENST00000603885 TMEM199Q8N511 208 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 PIBF1Q8WXW3 757 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 KIAA1217Q5T5P2 1943 aa20.97■□□□□ 0.95
CCDC12-208ENST00000603885 B4GALT4O60513 344 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 CALM1P0DP23 149 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 CALM2P0DP24 149 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 CALM3P0DP25 149 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 SMARCA1P28370 1054 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 LY6KQ17RY6 165 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 RRP36Q96EU6 259 aaKnown RBP20.96■□□□□ 0.95
CCDC12-208ENST00000603885 PDCD2LQ9BRP1 358 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 TRPV6Q9H1D0 765 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 ALDH8A1Q9H2A2 487 aaPredicted RBP20.96■□□□□ 0.95
CCDC12-208ENST00000603885 HIPK3Q9H422 1215 aa20.96■□□□□ 0.95
CCDC12-208ENST00000603885 MYCLP12524 364 aaPredicted RBP20.95■□□□□ 0.94
CCDC12-208ENST00000603885 COL9A3Q14050 684 aaPredicted RBP20.95■□□□□ 0.94
CCDC12-208ENST00000603885 SEC63Q9UGP8 760 aaKnown RBP20.95■□□□□ 0.94
CCDC12-208ENST00000603885 SLC12A7Q9Y666 1083 aa20.95■□□□□ 0.94
CCDC12-208ENST00000603885 MRVI1Q9Y6F6 885 aa20.95■□□□□ 0.94
CCDC12-208ENST00000603885 SCN10AQ9Y5Y9 1956 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 SUPT20HL2P0C7V6 817 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 CSF2RAP15509 400 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 CYP2C18P33260 490 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 SMAD3P84022 425 aaKnown RBP20.94■□□□□ 0.94
CCDC12-208ENST00000603885 ARHGAP1Q07960 439 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 PGM5Q15124 567 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 FAM109BQ6ICB4 259 aaPredicted RBP20.94■□□□□ 0.94
CCDC12-208ENST00000603885 FCHSD1Q86WN1 690 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 AFG1LQ8WV93 481 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 NEK1Q96PY6 1258 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms