RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 PPP1R12CQ9BZL4 782 aa19.03■□□□□ 0.64
TUBE1-206ENST00000603722 PCDHA1Q9Y5I3 950 aa19.03■□□□□ 0.64
TUBE1-206ENST00000603722 SLC27A2O14975 620 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
TUBE1-206ENST00000603722 ARIH2O95376 493 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 CD4P01730 458 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 MYL3P08590 195 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 TXNP10599 105 aaKnown RBP19.02■□□□□ 0.64
TUBE1-206ENST00000603722 EIF2AK2P19525 551 aaKnown RBP19.02■□□□□ 0.64
TUBE1-206ENST00000603722 TTLL4Q14679 1199 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 ARHGEF16Q5VV41 709 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 CASC1Q6TDU7 716 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.64
TUBE1-206ENST00000603722 LY9Q9HBG7 655 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 GPHNQ9NQX3 736 aaPredicted RBP19.02■□□□□ 0.64
TUBE1-206ENST00000603722 MCM3APO60318 1980 aa19.02■□□□□ 0.64
TUBE1-206ENST00000603722 PRC1O43663 620 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 CYTH3O43739 400 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 HSD17B4P51659 736 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 PURAQ00577 322 aaKnown RBP19.01■□□□□ 0.63
TUBE1-206ENST00000603722 CREB3L3Q68CJ9 461 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 MFSD5Q6N075 450 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 SEPT14Q6ZU15 432 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 MYL10Q9BUA6 226 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 RIOX1Q9H6W3 641 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 PXMP2Q9NR77 195 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 POLR3EQ9NVU0 708 aa19.01■□□□□ 0.63
TUBE1-206ENST00000603722 COL9A3Q14050 684 aaPredicted RBP19■□□□□ 0.63
TUBE1-206ENST00000603722 STXBP2Q15833 593 aa19■□□□□ 0.63
TUBE1-206ENST00000603722 BRDTQ58F21 947 aaPredicted RBP19■□□□□ 0.63
TUBE1-206ENST00000603722 ZNF654Q8IZM8 581 aa19■□□□□ 0.63
TUBE1-206ENST00000603722 PIBF1Q8WXW3 757 aa19■□□□□ 0.63
TUBE1-206ENST00000603722 IWS1Q96ST2 819 aa19■□□□□ 0.63
TUBE1-206ENST00000603722 TRPV6Q9H1D0 765 aa19■□□□□ 0.63
TUBE1-206ENST00000603722 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
TUBE1-206ENST00000603722 B4GALT4O60513 344 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 DDAH1O94760 285 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 HOXA13P31271 388 aaPredicted RBP18.99■□□□□ 0.63
TUBE1-206ENST00000603722 MCM5P33992 734 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 GHRHRQ02643 423 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 PPIGQ13427 754 aaKnown RBP eCLIP18.99■□□□□ 0.63
TUBE1-206ENST00000603722 NECTIN1Q15223 517 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 LY6KQ17RY6 165 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 CCDC62Q6P9F0 684 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 NFXL1Q6ZNB6 911 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
TUBE1-206ENST00000603722 MTG1Q9BT17 334 aaPredicted RBP18.99■□□□□ 0.63
TUBE1-206ENST00000603722 SEZ6LQ9BYH1 1024 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 HIPK3Q9H422 1215 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 MTMR10Q9NXD2 777 aa18.99■□□□□ 0.63
TUBE1-206ENST00000603722 LAMA2P24043 3122 aaKnown RBP18.98■□□□□ 0.63
TUBE1-206ENST00000603722 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 A6NJR5 290 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 NR3C2P08235 984 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 CSF2RAP15509 400 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 CYP2C18P33260 490 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 TMEM199Q8N511 208 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 FAM161BQ96MY7 647 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 MTA3Q9BTC8 594 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 ALDH8A1Q9H2A2 487 aaPredicted RBP18.98■□□□□ 0.63
TUBE1-206ENST00000603722 UMODL1Q5DID0 1318 aa18.98■□□□□ 0.63
TUBE1-206ENST00000603722 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 GCOM1H8Y6P7 765 aaPredicted RBP18.97■□□□□ 0.63
TUBE1-206ENST00000603722 EIF3JO75822 258 aaKnown RBP18.97■□□□□ 0.63
TUBE1-206ENST00000603722 POLR2MP0CAP2 368 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 TRAF1Q13077 416 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 FAM47CQ5HY64 1035 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 PPP1R13LQ8WUF5 828 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 TMEM87BQ96K49 555 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 MAP3K14Q99558 947 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.97■□□□□ 0.63
TUBE1-206ENST00000603722 PDCD2LQ9BRP1 358 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 LRRC2Q9BYS8 371 aa18.97■□□□□ 0.63
TUBE1-206ENST00000603722 TRMT13Q9NUP7 481 aaKnown RBP18.97■□□□□ 0.63
TUBE1-206ENST00000603722 GH1P01241 217 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 MYCLP12524 364 aaPredicted RBP18.96■□□□□ 0.63
TUBE1-206ENST00000603722 RXRAP19793 462 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 KIF5BP33176 963 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
TUBE1-206ENST00000603722 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 FAM109BQ6ICB4 259 aaPredicted RBP18.96■□□□□ 0.63
TUBE1-206ENST00000603722 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 IL31RAQ8NI17 732 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 AFG1LQ8WV93 481 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 NOC4LQ9BVI4 516 aaKnown RBP18.96■□□□□ 0.63
TUBE1-206ENST00000603722 MAP3K20Q9NYL2 800 aaKnown RBP18.96■□□□□ 0.63
TUBE1-206ENST00000603722 MRVI1Q9Y6F6 885 aa18.96■□□□□ 0.63
TUBE1-206ENST00000603722 KPNA6O60684 536 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 CDC45O75419 566 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 PLEKHA8P1O95397 391 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 MMP3P08254 477 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 ACRP10323 421 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 CCL23P55773 120 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 CHMP4BP1P59074 171 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 PGM5Q15124 567 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 NBPF20Q3BBV1 942 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 RNF20Q5VTR2 975 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 FCHSD1Q86WN1 690 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms