RNA–Protein interactions for RNA: ENST00000602303.5

UBE2E3-204, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 5

Gene UBE2E3, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-204ENST00000602303 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 IKBKEQ14164 716 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 NBPF20Q3BBV1 942 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 CLASRPQ8N2M8 674 aaKnown RBP8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 FBXO22Q8NEZ5 403 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 SCFD2Q8WU76 684 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 STAG1Q8WVM7 1258 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 TRERF1Q96PN7 1200 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 WDR11Q9BZH6 1224 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 MAF1Q9H063 256 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 PDGFCQ9NRA1 345 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 MTMR4Q9NYA4 1195 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 METRNQ9UJH8 293 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 MYH4Q9Y623 1939 aa8.11□□□□□ -1.11
UBE2E3-204ENST00000602303 EMSYQ7Z589 1322 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 TECTAO75443 2155 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 ZFHX2Q9C0A1 2572 aaPredicted RBP8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 PTPRSQ13332 1948 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 PRKAB2O43741 272 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 HTRA4P83105 476 aaPredicted RBP8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 FAM47CQ5HY64 1035 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 LRRC8DQ7L1W4 858 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 FBXO16Q8IX29 292 aaPredicted RBP8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 EDAQ92838 391 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 PAG1Q9NWQ8 432 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 CLIP2Q9UDT6 1046 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 TRIP12Q14669 1992 aaPredicted RBP8.1□□□□□ -1.11
UBE2E3-204ENST00000602303 RIF1Q5UIP0 2472 aaKnown RBP8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 CYP2D7A0A087X1C5 515 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 H3BNC9 293 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 MYL3P08590 195 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 ATP5JP18859 108 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 IRS1P35568 1242 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 GPNMBQ14956 572 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 PPP2R5BQ15173 497 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 PTGISQ16647 500 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 SLFN13Q68D06 897 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 ZNF444Q8N0Y2 327 aaPredicted RBP8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 TMEM57Q8N5G2 664 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 DNERQ8NFT8 737 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 OR6J1Q8NGC5 347 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 LMAN2LQ9H0V9 348 aa8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
UBE2E3-204ENST00000602303 MYH7P12883 1935 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 TMEM232C9JQI7 657 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 PROB1E7EW31 1015 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 AMHP03971 560 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 ICAM1P05362 532 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 ALAS1P13196 640 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 GNAT2P19087 354 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 EDNRBP24530 442 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 SLC1A4P43007 532 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 ALDH5A1P51649 535 aaPredicted RBP8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 DEFB103AP81534 67 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 RCSD1Q6JBY9 416 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 EEPD1Q7L9B9 569 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 SUGP1Q8IWZ8 645 aaKnown RBP8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 PRSS33Q8NF86 280 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 CEP95Q96GE4 821 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 HAUS7Q99871 368 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 KATNAL1Q9BW62 490 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 FAM186AA6NE01 2351 aa8.08□□□□□ -1.12
UBE2E3-204ENST00000602303 MICAL3Q7RTP6 2002 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 ZNF316A6NFI3 1004 aaPredicted RBP8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 C5orf67F2Z3F1 127 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 H3BQ06 376 aaPredicted RBP8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 GFRA3O60609 400 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 NBNO60934 754 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 RB1P06400 928 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 CKBP12277 381 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 PDE4BQ07343 736 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 PTK7Q13308 1070 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 SMAD4Q13485 552 aaKnown RBP8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 EPC2Q52LR7 807 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 CEP85Q6P2H3 762 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 TRIM67Q6ZTA4 783 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 FBXL6Q8N531 539 aa8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 FRAT1Q92837 279 aaPredicted RBP8.07□□□□□ -1.12
UBE2E3-204ENST00000602303 CLUAP1Q96AJ1 413 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms