RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SLC37A4O43826 429 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 MARCH6O60337 910 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 CYP3A4P08684 503 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 ZNF76P36508 570 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 TXLNAP40222 546 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 MOGSQ13724 837 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 IL17AQ16552 155 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 SYMPKQ92797 1274 aaKnown RBP20.38■□□□□ 0.85
VRK3-225ENST00000601912 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 MAF1Q9H063 256 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 RIPK3Q9Y572 518 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 CIITAP33076 1130 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 TMEM266Q2M3C6 531 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 LRSAM1Q6UWE0 723 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 EPSTI1Q96J88 318 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 AK8Q96MA6 479 aa20.37■□□□□ 0.85
VRK3-225ENST00000601912 PYM1Q9BRP8 204 aaKnown RBP20.37■□□□□ 0.85
VRK3-225ENST00000601912 COL11A1P12107 1806 aaPredicted RBP20.36■□□□□ 0.85
VRK3-225ENST00000601912 ZBTB48P10074 688 aaPredicted RBP20.36■□□□□ 0.85
VRK3-225ENST00000601912 HERVK_113P62684 666 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 NSMFQ6X4W1 530 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 MBOAT7Q96N66 472 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 RAB34Q9BZG1 259 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 ACAD9Q9H845 621 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
VRK3-225ENST00000601912 TXKP42681 527 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 HUNKP57058 714 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 RPS6P62753 249 aaKnown RBP20.35■□□□□ 0.85
VRK3-225ENST00000601912 Q4G0T1 1027 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 GPAT2Q6NUI2 795 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 USP49Q70CQ1 688 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 CHST13Q8NET6 341 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 SYTL5Q8TDW5 730 aaPredicted RBP20.35■□□□□ 0.85
VRK3-225ENST00000601912 CCDC34Q96HJ3 373 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 POLR2DO15514 142 aaKnown RBP20.35■□□□□ 0.85
VRK3-225ENST00000601912 PRR16Q569H4 304 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 SPRYD7Q5W111 196 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 RBM43Q6ZSC3 357 aaKnown RBP20.35■□□□□ 0.85
VRK3-225ENST00000601912 SLFN12Q8IYM2 578 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 CNNM3Q8NE01 707 aa20.35■□□□□ 0.85
VRK3-225ENST00000601912 HOOK1Q9UJC3 728 aaKnown RBP20.35■□□□□ 0.85
VRK3-225ENST00000601912 TRPM7Q96QT4 1865 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 CCL15-CCL14A0A0B4J2E2 113 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 TBX3O15119 743 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 UBA7P41226 1012 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 TECP42680 631 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.85
VRK3-225ENST00000601912 CCL15Q16663 113 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 RIOX2Q8IUF8 465 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 MS4A4AQ96JQ5 239 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 FBXO40Q9UH90 709 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 SLC45A1Q9Y2W3 748 aa20.34■□□□□ 0.85
VRK3-225ENST00000601912 GOLGA6L3A6NEY3 463 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 MKRN3Q13064 507 aaKnown RBP20.33■□□□□ 0.85
VRK3-225ENST00000601912 PDIA5Q14554 519 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 KANK3Q6NY19 840 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 KRBA2Q6ZNG9 492 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 PDILTQ8N807 584 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 GTF3C2Q8WUA4 911 aaPredicted RBP20.33■□□□□ 0.85
VRK3-225ENST00000601912 SPATC1LQ9H0A9 340 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 BTBD7Q9P203 1132 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 COL20A1Q9P218 1284 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 USP25Q9UHP3 1055 aa20.33■□□□□ 0.85
VRK3-225ENST00000601912 RPTORQ8N122 1335 aa20.33■□□□□ 0.84
VRK3-225ENST00000601912 FAM86B1E9PN63 330 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 FAM86B2P0C5J1 330 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 BAATQ14032 418 aaPredicted RBP20.32■□□□□ 0.84
VRK3-225ENST00000601912 LONRF3Q496Y0 759 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 ELOA2Q8IYF1 753 aaPredicted RBP20.32■□□□□ 0.84
VRK3-225ENST00000601912 HAS1Q92839 578 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 PAGR1Q9BTK6 254 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 TSPY26PQ9H489 355 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 TTC12Q9H892 705 aaPredicted RBP20.32■□□□□ 0.84
VRK3-225ENST00000601912 KCNMB3Q9NPA1 279 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 CCDC39Q9UFE4 941 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 PCDHA12Q9UN75 941 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 CCDC192P0DO97 292 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 COPB2P35606 906 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 UBXN2AP68543 259 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 SASS6Q6UVJ0 657 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 IGSF22Q8N9C0 903 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 IQUBQ8NA54 791 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 RASSF8Q8NHQ8 419 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 FAM20AQ96MK3 541 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 CCSER1Q9C0I3 900 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 LRWD1Q9UFC0 647 aa20.32■□□□□ 0.84
VRK3-225ENST00000601912 RBBP6Q7Z6E9 1792 aaKnown RBP20.31■□□□□ 0.84
VRK3-225ENST00000601912 SLC25A27O95847 323 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 CEP55Q53EZ4 464 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 POTEEQ6S8J3 1075 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 ANKRD23Q86SG2 305 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 CEP57L1Q8IYX8 460 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 SMC1BQ8NDV3 1235 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 DHX58Q96C10 678 aa20.31■□□□□ 0.84
VRK3-225ENST00000601912 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms