RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 RPS6KB1P23443 525 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 RCAN1P53805 252 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 TRAF1Q13077 416 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 CCDC62Q6P9F0 684 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 MICU3Q86XE3 530 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 IWS1Q96ST2 819 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 RMDN3Q96TC7 470 aa20.26■□□□□ 0.83
IRF3-230ENST00000601809 ARIH2O95376 493 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 ASGR1P07306 291 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 BEX3Q00994 111 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 PDE4DQ08499 809 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 TRIM60Q495X7 471 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 CHRDL2Q6WN34 429 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 RRP36Q96EU6 259 aaKnown RBP20.25■□□□□ 0.83
IRF3-230ENST00000601809 WDR11Q9BZH6 1224 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 LAMA3Q16787 3333 aa20.25■□□□□ 0.83
IRF3-230ENST00000601809 RGS20O76081 388 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 SYN1P17600 705 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 CDC27P30260 824 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
IRF3-230ENST00000601809 CDK7P50613 346 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 HABP4Q5JVS0 413 aaKnown RBP20.24■□□□□ 0.83
IRF3-230ENST00000601809 GNASQ5JWF2 1037 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 Q6ZUG5 572 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 PCSK9Q8NBP7 692 aaKnown RBP20.24■□□□□ 0.83
IRF3-230ENST00000601809 PIBF1Q8WXW3 757 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 PDCD2LQ9BRP1 358 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
IRF3-230ENST00000601809 ELP1O95163 1332 aa20.24■□□□□ 0.83
IRF3-230ENST00000601809 KLF18A0A0U1RQI7 1052 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 MEIS2O14770 477 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 DYNC1LI2O43237 492 aaPredicted RBP20.23■□□□□ 0.83
IRF3-230ENST00000601809 ZBTB43O43298 467 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 NR3C2P08235 984 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 EIF2AK2P19525 551 aaKnown RBP20.23■□□□□ 0.83
IRF3-230ENST00000601809 EVCP57679 992 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 SLC43A3Q8NBI5 491 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 IL31RAQ8NI17 732 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 SPC25Q9HBM1 224 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 PDLIM7Q9NR12 457 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
IRF3-230ENST00000601809 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
IRF3-230ENST00000601809 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 B4DLN1 442 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 GCOM1H8Y6P7 765 aaPredicted RBP20.22■□□□□ 0.83
IRF3-230ENST00000601809 PIK3CDO00329 1044 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 POLR2MP0CAP2 368 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 BMP8BP34820 402 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 MRPL12P52815 198 aaKnown RBP20.22■□□□□ 0.83
IRF3-230ENST00000601809 APOBRQ0VD83 1088 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 PGM5Q15124 567 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 FSCN1Q16658 493 aaKnown RBP20.22■□□□□ 0.83
IRF3-230ENST00000601809 ARHGEF16Q5VV41 709 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 VSIG10LQ86VR7 867 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 COPS5Q92905 334 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
IRF3-230ENST00000601809 TM6SF1Q9BZW5 370 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 GRIN2DO15399 1336 aa20.22■□□□□ 0.83
IRF3-230ENST00000601809 SCN10AQ9Y5Y9 1956 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 NKRFO15226 690 aaKnown RBP eCLIP20.21■□□□□ 0.83
IRF3-230ENST00000601809 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
IRF3-230ENST00000601809 MAGEA10P43363 369 aaPredicted RBP20.21■□□□□ 0.83
IRF3-230ENST00000601809 TLE2Q04725 743 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 STXBP2Q15833 593 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 RTN1Q16799 776 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 CCDC82Q8N4S0 544 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 BRF1Q92994 677 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 STARD7Q9NQZ5 370 aa20.21■□□□□ 0.83
IRF3-230ENST00000601809 TRIM43BA6NCK2 446 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 GOLGA8AA7E2F4 631 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 GOLGA8BA8MQT2 603 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 EIF3JO75822 258 aaKnown RBP20.2■□□□□ 0.82
IRF3-230ENST00000601809 PSMA5P28066 241 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
IRF3-230ENST00000601809 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 TYW1BQ6NUM6 668 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 SYNE3Q6ZMZ3 975 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 NOL8Q76FK4 1167 aaKnown RBP20.2■□□□□ 0.82
IRF3-230ENST00000601809 RUFY3Q7L099 469 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 SH3RF1Q7Z6J0 888 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 TRIM43Q96BQ3 446 aaPredicted RBP20.2■□□□□ 0.82
IRF3-230ENST00000601809 TOX2Q96NM4 488 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 AP5M1Q9H0R1 490 aa20.2■□□□□ 0.82
IRF3-230ENST00000601809 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
IRF3-230ENST00000601809 SZT2Q5T011 3432 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 A6NJR5 290 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 TXNP10599 105 aaKnown RBP20.19■□□□□ 0.82
IRF3-230ENST00000601809 ADD1P35611 737 aaKnown RBP20.19■□□□□ 0.82
IRF3-230ENST00000601809 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 TTLL4Q14679 1199 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 GLT1D1Q96MS3 346 aa20.19■□□□□ 0.82
IRF3-230ENST00000601809 DDX41Q9UJV9 622 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms