RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
SSBP4-211ENST00000601614 STX8Q9UNK0 236 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 KCNJ6P48051 423 aa18.98■□□□□ 0.63
SSBP4-211ENST00000601614 GJD3Q8N144 294 aa18.98■□□□□ 0.63
SSBP4-211ENST00000601614 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
SSBP4-211ENST00000601614 DDX19BQ9UMR2 479 aa18.98■□□□□ 0.63
SSBP4-211ENST00000601614 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■■□□ 16.2
SSBP4-211ENST00000601614 KIAA1217Q5T5P2 1943 aa18.98■□□□□ 0.63
SSBP4-211ENST00000601614 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 FOXP2O15409 715 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 ARIH2O95376 493 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 PTPN11Q06124 597 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-211ENST00000601614 PPP2R5BQ15173 497 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 LEXMQ3ZCV2 418 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 GDF6Q6KF10 455 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-211ENST00000601614 CLEC4DQ8WXI8 215 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 ZNF318Q5VUA4 2279 aa18.97■□□□□ 0.63
SSBP4-211ENST00000601614 MICAL3Q7RTP6 2002 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 ATG2AQ2TAZ0 1938 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 LINC01553A4QN01 128 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 NBNO60934 754 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 KCNA5P22460 613 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 EDNRBP24530 442 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 CALML3P27482 149 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 CHMP4BP1P59074 171 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 ERVK-21P61565 698 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSBP4-211ENST00000601614 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
SSBP4-211ENST00000601614 PTGISQ16647 500 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 CCDC96Q2M329 555 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
SSBP4-211ENST00000601614 NOD1Q9Y239 953 aa18.96■□□□□ 0.63
SSBP4-211ENST00000601614 NKRFO15226 690 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■□□□□ 10.9
SSBP4-211ENST00000601614 GJB5O95377 273 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 ZFYP08048 801 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-211ENST00000601614 NOVP48745 357 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 MRE11P49959 708 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 CTDSPL2Q05D32 466 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 BTNL9Q6UXG8 535 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 CAGE1Q8TC20 777 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 AFAP1L1Q8TED9 768 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 ZBED2Q9BTP6 218 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 NAPBQ9H115 298 aa18.95■□□□□ 0.62
SSBP4-211ENST00000601614 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 TSPY2A6NKD2 308 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 KPNA6O60684 536 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 CXCL10P02778 98 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 TXNP10599 105 aaKnown RBP18.94■□□□□ 0.62
SSBP4-211ENST00000601614 RPS6P62753 249 aaKnown RBP18.94■□□□□ 0.62
SSBP4-211ENST00000601614 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
SSBP4-211ENST00000601614 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 LRRC8DQ7L1W4 858 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 SCFD2Q8WU76 684 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 KAT2BQ92831 832 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
SSBP4-211ENST00000601614 MYO7AQ13402 2215 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 NLRC5Q86WI3 1866 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 RAD50Q92878 1312 aa18.94■□□□□ 0.62
SSBP4-211ENST00000601614 SELPP16109 830 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 SSTR3P32745 418 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-211ENST00000601614 PDE4DQ08499 809 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 FAM117BQ6P1L5 589 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 RNF207Q6ZRF8 634 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 DCAF4Q8WV16 495 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 RAD9AQ99638 391 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 C17orf80Q9BSJ5 609 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 NACAP1Q9BZK3 213 aa18.93■□□□□ 0.62
SSBP4-211ENST00000601614 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-211ENST00000601614 GRXCR2A6NFK2 248 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
SSBP4-211ENST00000601614 CKBP12277 381 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 NHLH1Q02575 133 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 RBL2Q08999 1139 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 PTCRAQ6ISU1 281 aaPredicted RBP18.92■□□□□ 0.62
SSBP4-211ENST00000601614 CCDC62Q6P9F0 684 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 TRAF7Q6Q0C0 670 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 SESTD1Q86VW0 696 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 AFG1LQ8WV93 481 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 UIMC1Q96RL1 719 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
SSBP4-211ENST00000601614 MMP3P08254 477 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 MS4A1P11836 297 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 MBTPS1Q14703 1052 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 ANKS1AQ92625 1134 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 WNT8BQ93098 351 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 FBXL18Q96ME1 805 aa18.91■□□□□ 0.62
SSBP4-211ENST00000601614 WDFY4Q6ZS81 3184 aa18.9■□□□□ 0.62
SSBP4-211ENST00000601614 ABHD14A-ACY1A0A1B0GW23 586 aa18.9■□□□□ 0.62
SSBP4-211ENST00000601614 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
SSBP4-211ENST00000601614 ARHGAP1Q07960 439 aa18.9■□□□□ 0.62
SSBP4-211ENST00000601614 ZMYM1Q5SVZ6 1142 aa18.9■□□□□ 0.62
SSBP4-211ENST00000601614 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSBP4-211ENST00000601614 NEK9Q8TD19 979 aa18.9■□□□□ 0.62
SSBP4-211ENST00000601614 H3BQ06 376 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-211ENST00000601614 ALADP13716 330 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 MKRN4PQ13434 485 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms