RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 SRBD1Q8N5C6 995 aaKnown RBP18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 GLT1D1Q96MS3 346 aa18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 UPF3AQ9H1J1 476 aaKnown RBP18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 COLQQ9Y215 455 aaPredicted RBP18.35■□□□□ 0.53
PPFIA4-213ENST00000601609 ZEB2O60315 1214 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 ASGR1P07306 291 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 PTGS1P23219 599 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 CST5P28325 142 aaPredicted RBP18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 SEPT14Q6ZU15 432 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 Q6ZUG5 572 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 TMTC3Q6ZXV5 915 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 KLHDC9Q8NEP7 349 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 OR6J1Q8NGC5 347 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 SCFD2Q8WU76 684 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 CUL5Q93034 780 aa18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 GNEQ9Y223 722 aaKnown RBP18.34■□□□□ 0.53
PPFIA4-213ENST00000601609 CEP290O15078 2479 aa18.33■□□□□ 0.53
PPFIA4-213ENST00000601609 hCG_1642624A0A1W2PR95 340 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 OPLAHO14841 1288 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 PQBP1O60828 265 aaKnown RBP18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 MYCLP12524 364 aaPredicted RBP18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 EDNRBP24530 442 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 HSD17B4P51659 736 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 STXBP2Q15833 593 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 FSCN1Q16658 493 aaKnown RBP18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 KCNB2Q92953 911 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 IWS1Q96ST2 819 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 PXMP2Q9NR77 195 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.52
PPFIA4-213ENST00000601609 TXNP10599 105 aaKnown RBP18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 TTLL4Q14679 1199 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 HEATR3Q7Z4Q2 680 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 BRF1Q92994 677 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 LBHD1Q9BQE6 289 aaPredicted RBP18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
PPFIA4-213ENST00000601609 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 NR3C2P08235 984 aa18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 HABP4Q5JVS0 413 aaKnown RBP18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 Q9Y3F1 56 aa18.31■□□□□ 0.52
PPFIA4-213ENST00000601609 A0A0U1RQG5 324 aaPredicted RBP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 NKRFO15226 690 aaKnown RBP eCLIP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 MYL3P08590 195 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 MAGEA10P43363 369 aaPredicted RBP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 CPT1AP50416 773 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 TLE2Q04725 743 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 SNX17Q15036 470 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 CCSAPQ6IQ19 270 aaPredicted RBP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 CXCL17Q6UXB2 119 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 PDCD2LQ9BRP1 358 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 MRVI1Q9Y6F6 885 aa18.3■□□□□ 0.52
PPFIA4-213ENST00000601609 ELP1O95163 1332 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 CCND2P30279 289 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 GHRHRQ02643 423 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 COPS5Q92905 334 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 GPKOWQ92917 476 aaPredicted RBP eCLIP18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 CYP46A1Q9Y6A2 500 aa18.29■□□□□ 0.52
PPFIA4-213ENST00000601609 MROH7Q68CQ1 1323 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 CCDC196A0A1B0GTZ2 297 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 DCDC2CA8MYV0 355 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 CTAGE5O15320 804 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 EIF3JO75822 258 aaKnown RBP18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 CABYRO75952 493 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 CLTBP09497 229 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 PGM5Q15124 567 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 UBE2OQ9C0C9 1292 aaKnown RBP18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
PPFIA4-213ENST00000601609 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 ARIH2O95376 493 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 GH1P01241 217 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 RCAN1P53805 252 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 NAPAP54920 295 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 LY6KQ17RY6 165 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 IL31RAQ8NI17 732 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.52
PPFIA4-213ENST00000601609 TMEM39AQ9NV64 488 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms