RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 IWS1Q96ST2 819 aa26.35■■□□□ 1.81
SSBP4-209ENST00000601357 TLR3O15455 904 aaKnown RBP26.34■■□□□ 1.81
SSBP4-209ENST00000601357 CYTH3O43739 400 aa26.34■■□□□ 1.81
SSBP4-209ENST00000601357 CPT1AP50416 773 aa26.34■■□□□ 1.81
SSBP4-209ENST00000601357 FAM109BQ6ICB4 259 aaPredicted RBP26.34■■□□□ 1.81
SSBP4-209ENST00000601357 MFSD5Q6N075 450 aa26.34■■□□□ 1.81
SSBP4-209ENST00000601357 OR6J1Q8NGC5 347 aa26.34■■□□□ 1.81
SSBP4-209ENST00000601357 RMDN3Q96TC7 470 aa26.34■■□□□ 1.81
SSBP4-209ENST00000601357 ARIH2O95376 493 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 PSMC6P62333 389 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 PURAQ00577 322 aaKnown RBP26.33■■□□□ 1.81
SSBP4-209ENST00000601357 CCDC62Q6P9F0 684 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 MTA3Q9BTC8 594 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 LY9Q9HBG7 655 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 POLR3EQ9NVU0 708 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 MTMR10Q9NXD2 777 aa26.33■■□□□ 1.81
SSBP4-209ENST00000601357 A6NJR5 290 aa26.32■■□□□ 1.8
SSBP4-209ENST00000601357 TXNP10599 105 aaKnown RBP26.32■■□□□ 1.8
SSBP4-209ENST00000601357 NECTIN1Q15223 517 aa26.32■■□□□ 1.8
SSBP4-209ENST00000601357 COPS5Q92905 334 aa26.32■■□□□ 1.8
SSBP4-209ENST00000601357 PIGSQ96S52 555 aa26.32■■□□□ 1.8
SSBP4-209ENST00000601357 MAP3K20Q9NYL2 800 aaKnown RBP26.32■■□□□ 1.8
SSBP4-209ENST00000601357 PCDHA1Q9Y5I3 950 aa26.32■■□□□ 1.8
SSBP4-209ENST00000601357 SCN10AQ9Y5Y9 1956 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 SLC27A2O14975 620 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 CFBP00751 764 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 COL9A3Q14050 684 aaPredicted RBP26.31■■□□□ 1.8
SSBP4-209ENST00000601357 TTLL4Q14679 1199 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 CATIPQ7Z7H3 387 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 SAMD3Q8N6K7 520 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 MAP3K14Q99558 947 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 PXMP2Q9NR77 195 aa26.31■■□□□ 1.8
SSBP4-209ENST00000601357 B4GALT4O60513 344 aa26.3■■□□□ 1.8
SSBP4-209ENST00000601357 STXBP2Q15833 593 aa26.3■■□□□ 1.8
SSBP4-209ENST00000601357 HOMER1Q86YM7 354 aa26.3■■□□□ 1.8
SSBP4-209ENST00000601357 GPHNQ9NQX3 736 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-209ENST00000601357 BAZ2BQ9UIF8 2168 aaKnown RBP26.29■■□□□ 1.8
SSBP4-209ENST00000601357 PRC1O43663 620 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 EIF2AK2P19525 551 aaKnown RBP26.29■■□□□ 1.8
SSBP4-209ENST00000601357 SMAD3P84022 425 aaKnown RBP26.29■■□□□ 1.8
SSBP4-209ENST00000601357 TRAF1Q13077 416 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 ARHGEF16Q5VV41 709 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 CREB3L3Q68CJ9 461 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 C16orf59Q7L2K0 433 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 ZNF654Q8IZM8 581 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 RNPC3Q96LT9 517 aaKnown RBP26.29■■□□□ 1.8
SSBP4-209ENST00000601357 MTG1Q9BT17 334 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-209ENST00000601357 PPP1R12CQ9BZL4 782 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 TRPV6Q9H1D0 765 aa26.29■■□□□ 1.8
SSBP4-209ENST00000601357 PNMA6FA0A0J9YX94 578 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 KPNA6O60684 536 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 DDAH1O94760 285 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 NR3C2P08235 984 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 MYL3P08590 195 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 MCM5P33992 734 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 PPIGQ13427 754 aaKnown RBP eCLIP26.28■■□□□ 1.83e-8■■■■□ 19.4
SSBP4-209ENST00000601357 BRDTQ58F21 947 aaPredicted RBP26.28■■□□□ 1.8
SSBP4-209ENST00000601357 TMEM199Q8N511 208 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 ALDH8A1Q9H2A2 487 aaPredicted RBP26.28■■□□□ 1.8
SSBP4-209ENST00000601357 ANO2Q9NQ90 1003 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 CDH23Q9H251 3354 aa26.28■■□□□ 1.8
SSBP4-209ENST00000601357 SH2B2O14492 632 aaPredicted RBP26.27■■□□□ 1.8
SSBP4-209ENST00000601357 EIF3JO75822 258 aaKnown RBP26.27■■□□□ 1.8
SSBP4-209ENST00000601357 CSF2RAP15509 400 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 CYP2C18P33260 490 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 CASC1Q6TDU7 716 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 SEPT14Q6ZU15 432 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 TMEM87BQ96K49 555 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.27■■□□□ 1.82e-9■□□□□ 10.9
SSBP4-209ENST00000601357 PDCD2LQ9BRP1 358 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 HIPK3Q9H422 1215 aa26.27■■□□□ 1.8
SSBP4-209ENST00000601357 ARHGAP1Q07960 439 aa26.26■■□□□ 1.79
SSBP4-209ENST00000601357 LY6KQ17RY6 165 aa26.26■■□□□ 1.79
SSBP4-209ENST00000601357 MYL10Q9BUA6 226 aa26.26■■□□□ 1.79
SSBP4-209ENST00000601357 NOC4LQ9BVI4 516 aaKnown RBP26.26■■□□□ 1.79
SSBP4-209ENST00000601357 SPZ1Q9BXG8 430 aa26.26■■□□□ 1.79
SSBP4-209ENST00000601357 STXBP5LQ9Y2K9 1186 aa26.26■■□□□ 1.79
SSBP4-209ENST00000601357 UMODL1Q5DID0 1318 aa26.25■■□□□ 1.79
SSBP4-209ENST00000601357 SMARCA1P28370 1054 aa26.25■■□□□ 1.79
SSBP4-209ENST00000601357 HOXA13P31271 388 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-209ENST00000601357 LIFRP42702 1097 aa26.25■■□□□ 1.79
SSBP4-209ENST00000601357 TMEM240Q5SV17 173 aa26.25■■□□□ 1.79
SSBP4-209ENST00000601357 TMTC2Q8N394 836 aa26.25■■□□□ 1.79
SSBP4-209ENST00000601357 RGS20O76081 388 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 GH1P01241 217 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 NBPF20Q3BBV1 942 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 RASIP1Q5U651 963 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 NFRKBQ6P4R8 1299 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 CTCFLQ8NI51 663 aaPredicted RBP26.24■■□□□ 1.79
SSBP4-209ENST00000601357 EMID1Q96A84 441 aaPredicted RBP26.24■■□□□ 1.79
SSBP4-209ENST00000601357 GUCD1Q96NT3 240 aa26.24■■□□□ 1.79
SSBP4-209ENST00000601357 DDX41Q9UJV9 622 aaKnown RBP26.24■■□□□ 1.79
SSBP4-209ENST00000601357 GCOM1H8Y6P7 765 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-209ENST00000601357 POLR2MP0CAP2 368 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 KIF5BP33176 963 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 PGM5Q15124 567 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 ZNF697Q5TEC3 545 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 VSIG10LQ86VR7 867 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 AFG1LQ8WV93 481 aa26.23■■□□□ 1.79
SSBP4-209ENST00000601357 WNT8AQ9H1J5 351 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms