RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 RMDN3Q96TC7 470 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 MAP3K20Q9NYL2 800 aaKnown RBP18.22■□□□□ 0.51
RPS28-203ENST00000600659 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
RPS28-203ENST00000600659 TNFAIP2Q03169 654 aa18.21■□□□□ 0.51
RPS28-203ENST00000600659 PDCD2LQ9BRP1 358 aa18.21■□□□□ 0.51
RPS28-203ENST00000600659 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
RPS28-203ENST00000600659 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 KBTBD13C9JR72 458 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 H0YGN5 161 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 MEIS2O14770 477 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 ARIH2O95376 493 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 EIF2AK2P19525 551 aaKnown RBP18.2■□□□□ 0.5
RPS28-203ENST00000600659 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■□□□□ 11
RPS28-203ENST00000600659 ANAPC15P60006 121 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 PDE4DQ08499 809 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 TRAF1Q13077 416 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 NTRK3Q16288 839 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 DUSP28Q4G0W2 176 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 WWC2Q6AWC2 1192 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 IQSEC1Q6DN90 963 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 RNF180Q86T96 592 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 TLK2Q86UE8 772 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
RPS28-203ENST00000600659 DPF3Q92784 378 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
RPS28-203ENST00000600659 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
RPS28-203ENST00000600659 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
RPS28-203ENST00000600659 DOCK5Q9H7D0 1870 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
RPS28-203ENST00000600659 RGS20O76081 388 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 PDIA3P30101 505 aaKnown RBP18.19■□□□□ 0.5
RPS28-203ENST00000600659 FGD1P98174 961 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 IWS1Q96ST2 819 aa18.19■□□□□ 0.5
RPS28-203ENST00000600659 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
RPS28-203ENST00000600659 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
RPS28-203ENST00000600659 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 PIK3CDO00329 1044 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
RPS28-203ENST00000600659 NR3C2P08235 984 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 C6orf222P0C671 652 aaPredicted RBP18.18■□□□□ 0.5
RPS28-203ENST00000600659 ACLYP53396 1101 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 ATN1P54259 1190 aaPredicted RBP18.18■□□□□ 0.5
RPS28-203ENST00000600659 BEX3Q00994 111 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 PGM5Q15124 567 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 KCNA10Q16322 511 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 CCDC62Q6P9F0 684 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 FERMT2Q96AC1 680 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 WDR11Q9BZH6 1224 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 Q9Y3F1 56 aa18.18■□□□□ 0.5
RPS28-203ENST00000600659 MOXD2PA6NHM9 499 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 EVI5O60447 810 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 PKN1Q16512 942 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 C1orf53Q5VUE5 145 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 ARHGEF16Q5VV41 709 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 FCHSD1Q86WN1 690 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 C7orf61Q8IZ16 206 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 COPS5Q92905 334 aa18.17■□□□□ 0.5
RPS28-203ENST00000600659 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
RPS28-203ENST00000600659 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
RPS28-203ENST00000600659 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
RPS28-203ENST00000600659 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
RPS28-203ENST00000600659 STXBP3O00186 592 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 DYNC1LI2O43237 492 aaPredicted RBP18.16■□□□□ 0.5
RPS28-203ENST00000600659 ASGR1P07306 291 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 RTP1P59025 263 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 STXBP2Q15833 593 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 HEATR3Q7Z4Q2 680 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 VSIG10LQ86VR7 867 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 SCFD2Q8WU76 684 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 MPHOSPH6Q99547 160 aaKnown RBP18.16■□□□□ 0.5
RPS28-203ENST00000600659 PDRG1Q9NUG6 133 aa18.16■□□□□ 0.5
RPS28-203ENST00000600659 LAMA3Q16787 3333 aa18.15■□□□□ 0.5
RPS28-203ENST00000600659 CCT2P78371 535 aaKnown RBP18.15■□□□□ 0.5
RPS28-203ENST00000600659 MRPS9P82933 396 aaKnown RBP18.15■□□□□ 0.5
RPS28-203ENST00000600659 ALDH8A1Q9H2A2 487 aaPredicted RBP18.15■□□□□ 0.5
RPS28-203ENST00000600659 PRO3102Q9H379 93 aa18.15■□□□□ 0.5
RPS28-203ENST00000600659 CCDC196A0A1B0GTZ2 297 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 B4DLN1 442 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 ADAMTS3O15072 1205 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 IFNAR1P17181 557 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 UBE2SQ16763 222 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 PFKFB3Q16875 520 aaPredicted RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 GNASQ5JWF2 1037 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 PPP1R18Q6NYC8 613 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 SEPT14Q6ZU15 432 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 PHKBQ93100 1093 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 ZNF274Q96GC6 653 aaPredicted RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.49
RPS28-203ENST00000600659 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms