RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RMDN3Q96TC7 470 aa18.38■□□□□ 0.53
VRK3-221ENST00000600284 RIOX1Q9H6W3 641 aa18.38■□□□□ 0.53
VRK3-221ENST00000600284 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
VRK3-221ENST00000600284 SUPT20HL2P0C7V6 817 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 HSD17B4P51659 736 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 TROAPQ12815 778 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 STOX1Q6ZVD7 989 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 IGDCC4Q8TDY8 1250 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 MTG1Q9BT17 334 aaPredicted RBP18.37■□□□□ 0.53
VRK3-221ENST00000600284 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
VRK3-221ENST00000600284 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
VRK3-221ENST00000600284 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
VRK3-221ENST00000600284 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
VRK3-221ENST00000600284 CFBP00751 764 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 MYL3P08590 195 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 PSMC6P62333 389 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 ARHGEF16Q5VV41 709 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 CCDC62Q6P9F0 684 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 CATIPQ7Z7H3 387 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
VRK3-221ENST00000600284 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.537e-9■■□□□ 12.4
VRK3-221ENST00000600284 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
VRK3-221ENST00000600284 HIPK3Q9H422 1215 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 TAF6LQ9Y6J9 622 aa18.36■□□□□ 0.53
VRK3-221ENST00000600284 TMEM265A0A087WTH1 108 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 OPLAHO14841 1288 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 B4GALT4O60513 344 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
VRK3-221ENST00000600284 CSF2RAP15509 400 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 ANTXR2P58335 489 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 TMEM240Q5SV17 173 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 PSRC1Q6PGN9 363 aaPredicted RBP18.35■□□□□ 0.53
VRK3-221ENST00000600284 C16orf59Q7L2K0 433 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
VRK3-221ENST00000600284 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 PPP1R12CQ9BZL4 782 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
VRK3-221ENST00000600284 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
VRK3-221ENST00000600284 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 PPP1R11O60927 126 aaPredicted RBP18.34■□□□□ 0.53
VRK3-221ENST00000600284 ARIH2O95376 493 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 NR3C2P08235 984 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 CYP2C18P33260 490 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 PTPN11Q06124 597 aaPredicted RBP18.34■□□□□ 0.53
VRK3-221ENST00000600284 RASIP1Q5U651 963 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 NFRKBQ6P4R8 1299 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 COPS5Q92905 334 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 GUCD1Q96NT3 240 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 PIGSQ96S52 555 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
VRK3-221ENST00000600284 TRPV6Q9H1D0 765 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 SENP2Q9HC62 589 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
VRK3-221ENST00000600284 CYTH3O43739 400 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 GH1P01241 217 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 EIF2AK2P19525 551 aaKnown RBP18.33■□□□□ 0.52
VRK3-221ENST00000600284 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 BMP2KLQ5H9B9 411 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 SEPT14Q6ZU15 432 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 LAMA2P24043 3122 aaKnown RBP18.33■□□□□ 0.52
VRK3-221ENST00000600284 MYH6P13533 1939 aa18.33■□□□□ 0.52
VRK3-221ENST00000600284 DDAH1O94760 285 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 KIF5BP33176 963 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 MCM5P33992 734 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 LY6KQ17RY6 165 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 NBPF20Q3BBV1 942 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 KCNV1Q6PIU1 500 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 ZNF365Q70YC5 407 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 HOMER1Q86YM7 354 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
VRK3-221ENST00000600284 EMID1Q96A84 441 aaPredicted RBP18.32■□□□□ 0.52
VRK3-221ENST00000600284 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 PDCD2LQ9BRP1 358 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 LY9Q9HBG7 655 aa18.32■□□□□ 0.52
VRK3-221ENST00000600284 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
VRK3-221ENST00000600284 GCOM1H8Y6P7 765 aaPredicted RBP18.31■□□□□ 0.52
VRK3-221ENST00000600284 PRC1O43663 620 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 FGBP02675 491 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 POLR2MP0CAP2 368 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
VRK3-221ENST00000600284 ARHGAP1Q07960 439 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
VRK3-221ENST00000600284 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 FAM161BQ96MY7 647 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 SPZ1Q9BXG8 430 aa18.31■□□□□ 0.52
VRK3-221ENST00000600284 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
VRK3-221ENST00000600284 COL6A3P12111 3177 aa18.3■□□□□ 0.52
VRK3-221ENST00000600284 SLC27A2O14975 620 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms