RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RNF41Q9H4P4 317 aaPredicted RBP17.21■□□□□ 0.35
IRF3-223ENST00000599223 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 MYOGP15173 224 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 TTLL4Q14679 1199 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 RAB30Q15771 203 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
IRF3-223ENST00000599223 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
IRF3-223ENST00000599223 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
IRF3-223ENST00000599223 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
IRF3-223ENST00000599223 ZNF213O14771 459 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 NBPF20Q3BBV1 942 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 PNMA2Q9UL42 364 aa17.19■□□□□ 0.34
IRF3-223ENST00000599223 COL4A4P53420 1690 aaPredicted RBP17.19■□□□□ 0.34
IRF3-223ENST00000599223 A6NJR5 290 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 TXNP10599 105 aaKnown RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 MFAP1P55081 439 aaKnown RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 QRICH1Q2TAL8 776 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 FAM47CQ5HY64 1035 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 CCDC62Q6P9F0 684 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 SYTL5Q8TDW5 730 aaPredicted RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 ANKS1AQ92625 1134 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 CTAGE1Q96RT6 745 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 GAS2L1Q99501 681 aaPredicted RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
IRF3-223ENST00000599223 MSRAQ9UJ68 235 aa17.18■□□□□ 0.34
IRF3-223ENST00000599223 MYH7BA7E2Y1 1941 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 NKRFO15226 690 aaKnown RBP eCLIP17.17■□□□□ 0.34
IRF3-223ENST00000599223 ARHGAP1Q07960 439 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 DSCC1Q9BVC3 393 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 ABCB11O95342 1321 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 RAD50Q92878 1312 aa17.17■□□□□ 0.34
IRF3-223ENST00000599223 ZBBXA8MT70 800 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 OPLAHO14841 1288 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 AAMPQ13685 434 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 NFRKBQ6P4R8 1299 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 JMJD4Q9H9V9 463 aa17.16■□□□□ 0.34
IRF3-223ENST00000599223 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
IRF3-223ENST00000599223 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
IRF3-223ENST00000599223 PRRC2BQ5JSZ5 2229 aaKnown RBP17.16■□□□□ 0.34
IRF3-223ENST00000599223 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
IRF3-223ENST00000599223 ARHGEF15O94989 841 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 MMP3P08254 477 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 SUPT20HL2P0C7V6 817 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 ATP2A2P16615 1042 aaKnown RBP17.15■□□□□ 0.34
IRF3-223ENST00000599223 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
IRF3-223ENST00000599223 LY6KQ17RY6 165 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 TJAP1Q5JTD0 557 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 PPP2R2DQ66LE6 453 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 SEPT14Q6ZU15 432 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 STAG2Q8N3U4 1231 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 MPHOSPH6Q99547 160 aaKnown RBP17.15■□□□□ 0.34
IRF3-223ENST00000599223 SLC28A3Q9HAS3 691 aa17.15■□□□□ 0.34
IRF3-223ENST00000599223 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
IRF3-223ENST00000599223 NCOR1O75376 2440 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 PFKMP08237 780 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.33
IRF3-223ENST00000599223 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
IRF3-223ENST00000599223 IGFBP4P22692 258 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 PDE4AP27815 886 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 CHMP4BP1P59074 171 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 IMMTQ16891 758 aaKnown RBP17.14■□□□□ 0.33
IRF3-223ENST00000599223 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 RPUSD2Q8IZ73 545 aaKnown RBP17.14■□□□□ 0.33
IRF3-223ENST00000599223 KAT2BQ92831 832 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
IRF3-223ENST00000599223 EPOPA6NHQ4 379 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 DHX16O60231 1041 aaKnown RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 KPNA6O60684 536 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 CA3P07451 260 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 IQCF3P0C7M6 154 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 SEC23AQ15436 765 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 GDF6Q6KF10 455 aaPredicted RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 DHX38Q92620 1227 aaKnown RBP17.13■□□□□ 0.33
IRF3-223ENST00000599223 RMDN3Q96TC7 470 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
IRF3-223ENST00000599223 DOCK5Q9H7D0 1870 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms