RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 DOK7Q18PE1 504 aa21.89■■□□□ 1.09
GRAMD1A-207ENST00000598118 TSR1Q2NL82 804 aaKnown RBP21.89■■□□□ 1.09
GRAMD1A-207ENST00000598118 STK17AQ9UEE5 414 aa21.89■■□□□ 1.09
GRAMD1A-207ENST00000598118 ATP6V0A2Q9Y487 856 aa21.89■■□□□ 1.09
GRAMD1A-207ENST00000598118 CCDC151A5D8V7 595 aa21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 MEX3CQ5U5Q3 659 aaKnown RBP21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 UNC13DQ70J99 1090 aa21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 FAM114A1Q8IWE2 563 aa21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 HAUS4Q9H6D7 363 aa21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 RIC8AQ9NPQ8 531 aa21.88■■□□□ 1.09
GRAMD1A-207ENST00000598118 RCCD1A6NED2 376 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 PPP1R2P41236 205 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 CLK2P49760 499 aaKnown RBP21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 ECM1Q16610 540 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 LONRF2Q1L5Z9 754 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 NCAPH2Q6IBW4 605 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 MSANTD4Q8NCY6 345 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 ERGIC2Q96RQ1 377 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 NUP58Q9BVL2 599 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 MYO6Q9UM54 1294 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 GREB1LQ9C091 1923 aaPredicted RBP21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 ENC1O14682 589 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZBED6P86452 979 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 PDIA5Q14554 519 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 TMEM266Q2M3C6 531 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 CDC42EP5Q6NZY7 148 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 RETREG2Q8NC44 543 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 GLIS3Q8NEA6 775 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 SNX29Q8TEQ0 813 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 RAD54LQ92698 747 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 CDK5RAP3Q96JB5 506 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 NHEJ1Q9H9Q4 299 aaPredicted RBP21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 HDAC6Q9UBN7 1215 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
GRAMD1A-207ENST00000598118 PVALEFA0A1B0GWK0 134 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 WHAMMP3Q1A5X7 153 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 CCDC122Q5T0U0 273 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 KCTD1Q719H9 257 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 HAS1Q92839 578 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 PCMTD1Q96MG8 357 aaPredicted RBP21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZC3H12CQ9C0D7 883 aaKnown RBP21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 LACRTQ9GZZ8 138 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 SUGT1Q9Y2Z0 365 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 USP17L10C9JJH3 530 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 PSMD14O00487 310 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 NFIAQ12857 509 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 BRD3Q15059 726 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 SLC27A3Q5K4L6 730 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 SWAP70Q9UH65 585 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 RAB21Q9UL25 225 aa21.86■■□□□ 1.09
GRAMD1A-207ENST00000598118 CTAGE15A4D2H0 777 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 RHOXF2BP0C7M4 288 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 CTAGE8P0CG41 777 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 ATP2B2Q01814 1243 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 PPP4R3AQ6IN85 833 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 CTAGE6Q86UF2 777 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZFPM1Q8IX07 1006 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 CTAGE4Q8IX94 777 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 NOA1Q8NC60 698 aaKnown RBP21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 DDX12PQ92771 950 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 RHOXF2Q9BQY4 288 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 EPHB6O15197 1021 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 POLR3GO15318 223 aaPredicted RBP21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 TMEM119Q4V9L6 283 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 KRT79Q5XKE5 535 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 APOBEC3HQ6NTF7 200 aaKnown RBP21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 TRAPPC11Q7Z392 1133 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZCCHC17Q9NP64 241 aaKnown RBP21.85■■□□□ 1.09
GRAMD1A-207ENST00000598118 MPHOSPH10O00566 681 aaKnown RBP21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 ATP1A1P05023 1023 aaKnown RBP21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 IDEP14735 1019 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 EHHADHQ08426 723 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 LRRC41Q15345 812 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 BEND6Q5SZJ8 279 aaPredicted RBP21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 PROM2Q8N271 834 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 UIMC1Q96RL1 719 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 DDX25Q9UHL0 483 aaKnown RBP21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 DUSP10Q9Y6W6 482 aa21.84■■□□□ 1.09
GRAMD1A-207ENST00000598118 PLEKP08567 350 aaPredicted RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 KRT83P78385 493 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 CYP27A1Q02318 531 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 SMC1AQ14683 1233 aaKnown RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 CCDC96Q2M329 555 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 SHROOM1Q2M3G4 852 aaPredicted RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 FIGNQ5HY92 759 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 PPP1R18Q6NYC8 613 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 GUF1Q8N442 669 aaKnown RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 JAKMIP2Q96AA8 810 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 RAB34Q9BZG1 259 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 SIK3Q9Y2K2 1263 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 MYO3BQ8WXR4 1341 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 A0A1W2PQJ5 194 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 EIF3CLB5ME19 914 aaKnown RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZNF263O14978 683 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 ZBTB5O15062 677 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 TRIM37O94972 964 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 ERCC3P19447 782 aa21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 CYLC1P35663 651 aaPredicted RBP21.83■■□□□ 1.09
GRAMD1A-207ENST00000598118 VWA3BQ502W6 1294 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms