RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 LETM2Q2VYF4 491 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 TBCKQ8TEA7 893 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 TUBE1Q9UJT0 475 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 SLC45A1Q9Y2W3 748 aa13.36□□□□□ -0.27
PDE4C-210ENST00000597297 A0A087WWV3 80 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
PDE4C-210ENST00000597297 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PRPHP41219 470 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 NLRP12P59046 1061 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 SP3Q02447 781 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PNOCQ13519 176 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 UBE2SQ16763 222 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 LUZP1Q86V48 1076 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PDILTQ8N807 584 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 P2RX7Q99572 595 aaKnown RBP13.35□□□□□ -0.27
PDE4C-210ENST00000597297 FEZ1Q99689 392 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 PCDHA1Q9Y5I3 950 aa13.35□□□□□ -0.27
PDE4C-210ENST00000597297 A0A087X0B3 334 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
PDE4C-210ENST00000597297 STAT2P52630 851 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 USP14P54578 494 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
PDE4C-210ENST00000597297 IQCB1Q15051 598 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 FAM83BQ5T0W9 1011 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 DHX58Q96C10 678 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 CCDC34Q96HJ3 373 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 C12orf42Q96LP6 360 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 PYM1Q9BRP8 204 aaKnown RBP13.34□□□□□ -0.27
PDE4C-210ENST00000597297 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
PDE4C-210ENST00000597297 ASCC2Q9H1I8 757 aaPredicted RBP13.34□□□□□ -0.27
PDE4C-210ENST00000597297 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
PDE4C-210ENST00000597297 BIN1O00499 593 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 NEMFO60524 1076 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
PDE4C-210ENST00000597297 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 SNAP25P60880 206 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 POSTNQ15063 836 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 CD99L2Q8TCZ2 262 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 PARK7Q99497 189 aaKnown RBP13.33□□□□□ -0.28
PDE4C-210ENST00000597297 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.28
PDE4C-210ENST00000597297 PEX10O60683 326 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 PLA2G6O60733 806 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 BCRP11274 1271 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 VCAM1P19320 739 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 OSBPP22059 807 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 TXLNAP40222 546 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDE4C-210ENST00000597297 DPCR1Q3MIW9 517 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 CATSPERGQ6ZRH7 1159 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 CHURC1Q8WUH1 139 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
PDE4C-210ENST00000597297 BPIFA3Q9BQP9 254 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 AP5Z1O43299 807 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 ADCY5O95622 1261 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 CTGFP29279 349 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 TRAF1Q13077 416 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 E2F4Q16254 413 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 MCTP2Q6DN12 878 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
PDE4C-210ENST00000597297 ARHGAP39Q9C0H5 1083 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 RPAP3Q9H6T3 665 aaPredicted RBP13.32□□□□□ -0.28
PDE4C-210ENST00000597297 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 PCDHA5Q9Y5H7 936 aa13.32□□□□□ -0.28
PDE4C-210ENST00000597297 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
PDE4C-210ENST00000597297 EDIL3O43854 480 aa13.31□□□□□ -0.28
PDE4C-210ENST00000597297 TDP2O95551 362 aa13.31□□□□□ -0.28
PDE4C-210ENST00000597297 IRX3P78415 501 aaPredicted RBP13.31□□□□□ -0.28
PDE4C-210ENST00000597297 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
PDE4C-210ENST00000597297 USH1GQ495M9 461 aa13.31□□□□□ -0.28
PDE4C-210ENST00000597297 NT5DC1Q5TFE4 455 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms