RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 USP17L13C9JLJ4 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L11C9JVI0 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L18D6R9N7 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L22D6RA61 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L17D6RBQ6 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L19D6RCP7 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L20D6RJB6 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L24Q0WX57 530 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 CNNM4Q6P4Q7 775 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L6PQ6QN14 398 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 A0A1W2PQC6 194 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 BICDL2A1A5D9 508 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 ECE2O60344 883 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 DACT2Q5SW24 774 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 MTMR8Q96EF0 704 aa25.37■■□□□ 1.65
SRRM1-222ENST00000596378 QRICH1Q2TAL8 776 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 CERKLQ49MI3 558 aaPredicted RBP25.36■■□□□ 1.65
SRRM1-222ENST00000596378 NOC3LQ8WTT2 800 aaKnown RBP25.36■■□□□ 1.65
SRRM1-222ENST00000596378 RAD54LQ92698 747 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 STK17AQ9UEE5 414 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 SLX4Q8IY92 1834 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 ARFGEF1Q9Y6D6 1849 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 PLSCR1O15162 318 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 MRPL12P52815 198 aaKnown RBP25.36■■□□□ 1.65
SRRM1-222ENST00000596378 KRT79Q5XKE5 535 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 PPP4R3AQ6IN85 833 aa25.36■■□□□ 1.65
SRRM1-222ENST00000596378 LUC7L2Q9Y383 392 aaKnown RBP25.36■■□□□ 1.65
SRRM1-222ENST00000596378 IDEP14735 1019 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 ARHGAP25P42331 645 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 MTIF2P46199 727 aaKnown RBP25.35■■□□□ 1.65
SRRM1-222ENST00000596378 DNM2P50570 870 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 SNAP25P60880 206 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 SEPT2Q15019 361 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 TEX35Q5T0J7 233 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 SLC35F6Q8N357 371 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 CCDC17Q96LX7 622 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 RAB34Q9BZG1 259 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 AGPAT5Q9NUQ2 364 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 REXO2Q9Y3B8 237 aaKnown RBP25.35■■□□□ 1.65
SRRM1-222ENST00000596378 RASSF10A6NK89 507 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 GDF11O95390 407 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 CHRNA5P30532 468 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 SLC1A4P43007 532 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 PDIA5Q14554 519 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 MIIPQ5JXC2 388 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 UNC13DQ70J99 1090 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 GLIS3Q8NEA6 775 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 OR8K1Q8NGG5 319 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 ZSWIM4Q9H7M6 989 aa25.35■■□□□ 1.65
SRRM1-222ENST00000596378 TBC1D8BQ0IIM8 1120 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 STRIP1Q5VSL9 837 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 WDR59Q6PJI9 974 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 SIAH1Q8IUQ4 282 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 SMAP1Q8IYB5 467 aaPredicted RBP25.34■■□□□ 1.65
SRRM1-222ENST00000596378 DNAJC7Q99615 494 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 TRIM10Q9UDY6 481 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 CAPN11Q9UMQ6 739 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 MARCH6O60337 910 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 TFRCP02786 760 aaKnown RBP25.34■■□□□ 1.65
SRRM1-222ENST00000596378 SLFN13Q68D06 897 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 NOC4LQ9BVI4 516 aaKnown RBP25.34■■□□□ 1.65
SRRM1-222ENST00000596378 PI4KBQ9UBF8 816 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 TFR2Q9UP52 801 aa25.34■■□□□ 1.65
SRRM1-222ENST00000596378 NDUFA10O95299 355 aa25.33■■□□□ 1.65
SRRM1-222ENST00000596378 CDC37Q16543 378 aaPredicted RBP25.33■■□□□ 1.65
SRRM1-222ENST00000596378 TMEM119Q4V9L6 283 aa25.33■■□□□ 1.65
SRRM1-222ENST00000596378 DDX12PQ92771 950 aa25.33■■□□□ 1.65
SRRM1-222ENST00000596378 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
SRRM1-222ENST00000596378 PCDHA1Q9Y5I3 950 aa25.33■■□□□ 1.65
SRRM1-222ENST00000596378 EPN1Q9Y6I3 576 aaPredicted RBP25.33■■□□□ 1.65
SRRM1-222ENST00000596378 LRRC41Q15345 812 aa25.32■■□□□ 1.64
SRRM1-222ENST00000596378 AOC3Q16853 763 aa25.32■■□□□ 1.64
SRRM1-222ENST00000596378 DHX36Q9H2U1 1008 aaKnown RBP25.32■■□□□ 1.64
SRRM1-222ENST00000596378 ZNF646O15015 1829 aaPredicted RBP25.32■■□□□ 1.64
SRRM1-222ENST00000596378 TAL1P17542 331 aaPredicted RBP25.32■■□□□ 1.64
SRRM1-222ENST00000596378 TRIM21P19474 475 aaKnown RBP25.32■■□□□ 1.64
SRRM1-222ENST00000596378 CENPPQ6IPU0 288 aa25.32■■□□□ 1.64
SRRM1-222ENST00000596378 TTYH3Q9C0H2 523 aa25.32■■□□□ 1.64
SRRM1-222ENST00000596378 ERCC3P19447 782 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 FAM114A1Q8IWE2 563 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 PCMTD1Q96MG8 357 aaPredicted RBP25.31■■□□□ 1.64
SRRM1-222ENST00000596378 IDI2Q9BXS1 227 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 TRIM34Q9BYJ4 488 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 KANSL2Q9H9L4 492 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 H0YIN7 160 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 ZSCAN20P17040 1043 aaPredicted RBP25.31■■□□□ 1.64
SRRM1-222ENST00000596378 ICA1Q05084 483 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 COBLL1Q53SF7 1204 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 RSRC2Q7L4I2 434 aaKnown RBP25.31■■□□□ 1.64
SRRM1-222ENST00000596378 TDRD3Q9H7E2 651 aaKnown RBP25.31■■□□□ 1.64
SRRM1-222ENST00000596378 PCDHA12Q9UN75 941 aa25.31■■□□□ 1.64
SRRM1-222ENST00000596378 PVALEFA0A1B0GWK0 134 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 JAG1P78504 1218 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 KIF4BQ2VIQ3 1234 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 MKL1Q969V6 931 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 NYAP2Q9P242 653 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 PUF60Q9UHX1 559 aaKnown RBP25.3■■□□□ 1.64
SRRM1-222ENST00000596378 PPP1R2P41236 205 aa25.3■■□□□ 1.64
SRRM1-222ENST00000596378 FLAD1Q8NFF5 587 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms